Agilent44KACCNUM {Agilent44K}R Documentation

Map Manufacturer ids to GenBank Accession Numbers

Description

Agilent44KACCNUM is an R environment that contains mappings between a manufacturer's ids and GenBank accession numbers.

Details

This environment was produced by first mapping the manufacturer's ids to Entrez Gene identifiers http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene. The mapped Entrez Gene ids then serve as the point of linkage to the GenBank accession numbers.

Each manufacturer id maps to a vector containing a GenBank accession number.

Package built: Sun Sep 03 07:50:36 2006

Examples

        # Convert to a list
        xx <- as.list(Agilent44KACCNUM)
        # Remove probe ids that do not map to any ACCNUM
        xx <- xx[!is.na(xx)]
        if(length(xx) > 0){
        # Get the ACCNUM for the first five probes
        xx[1:5]
        # Get the first one
        xx[[1]]
}

[Package Agilent44K version 1.0 Index]