LFSClassic {LFSPRO}R Documentation

The Classic criteria for Li-Fraumeni syndrome

Description

Use LFS Classic criteria to find out the TP53 mutation carriers in the family.

Usage

LFSClassic(fam.data, cancer.data, counselee.id)

Arguments

fam.data

Family information data. See fam.data for details.

cancer.data

Cancer information data. See cancer.data for details.

counselee.id

Data frame including two variables: fam.id (family id of counselees) and id (individual id of counselees).

Value

A data frame of three columns:fam.id, id and result. The result column is a vector of boolean variables for all the counselees indicating whether they are TP53 mutation carriers. TRUE: carrier. FALSE: non-carrier.

Author(s)

Gang Peng

References

Li, F. P., et al. (1988). A cancer family syndrome in twenty-four kindreds. Cancer Res, 48(18): 5358-5362.

See Also

LFSChompret, lfspro

Examples

options(stringsAsFactors = FALSE)
fam.id <- c("fam1","fam2","fam2","fam2","fam2")
id <- c(0,0,2,100,200)
counselee.id <- data.frame(fam.id, id)
LFSClassic(fam.data, cancer.data, counselee.id)

[Package LFSPRO version 1.0.5 Index]