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Aliases & Descriptionsfor HUS1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions HUS1 checkpoint homolog (S. pombe)1 2 checkpoint protein HUS12 hHUS12 3 OTTHUMP000002083652 HUS1 (S. pombe) checkpoint homolog1 OTTHUMP000002083662 hus1+-like protein2 OTTHUMP000002083782
Export aliases for HUS1 gene to outside databases Previous GC identifers: GC07M047650 GC07M047744 GC07M047777 GC07M047969
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Summariesfor HUS1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for HUS1 : The protein encoded by this gene is a component of an evolutionarily conserved, genotoxin-activated checkpoint complex that is involved in the cell cycle arrest in response to DNA damage. This protein forms a heterotrimeric complex with checkpoint proteins RAD9 and RAD1. In response to DNA damage, the trimeric complex interacts with another protein complex consisting of checkpoint protein RAD17 and four small subunits of the replication factor C (RFC), which loads the combined complex onto the chromatin. The DNA damage induced chromatin binding has been shown to depend on the activation of the checkpoint kinase ATM, and is thought to be an early checkpoint signaling event. (provided by RefSeq) UniProtKB/Swiss-Prot: HUS1_HUMAN, O60921 Function : Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavage activity on substrates with double, nick, or gap flaps of distinct sequences and lengths; and DNA ligase I (LIG1) on long-patch base excision repair substrates Gene Wiki entry for HUS1
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Genomic Viewsfor HUS1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the HUS1 gene promoter: p53 RFX1 POU2F1 STAT5A MIF-1 FOXO4 FOXO3b FOXO3a FOXL1 ATF-2 Other transcription factors Search SABiosciences Chromatin IP Primers for HUS1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for HUS1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 7p13-p12 Ensembl cytogenetic band: 7p12.3 HGNC cytogenetic band: 7p13-p12 HUS1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 7 GeneLoc Exon Structure
GeneLoc location for GC07M047735: view genomic region
(about GC identifiers )
Start:
47,735,328 bp from pter
End:
48,019,178 bp from pter
Size:
283,851 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000007.13 NT_007819.17 NT_079592.2
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Proteinsfor HUS1 gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: HUS1_HUMAN, O60921 (See
protein sequence )Recommended Name: Checkpoint protein HUS1 Size : 280 amino acids; 31691 Da
Subunit : Component of the toroidal 9-1-1 (RAD9-RAD1-HUS1) complex, composed of RAD9A, RAD1 and HUS1. The 9-1-1 complexassociates with LIG1, POLB, FEN1, RAD17, HDAC1, RPA1 and RPA2. The 9-1-1 complex associates with the RAD17-RFC complex. HUS1 interacts with POLB, HDAC1, FEN1, PCNA, RAD1, RAD9A and RAD9B. HUS1 does not interact with RAD17. Interacts with DNAJC7
Subcellular location : Nucleus. Cytoplasm. Note=In discrete nuclear foci upon DNA damage. According to PubMed:14500360,localized also in the cytoplasm. DNA damage induces its nuclear translocation. Shuttles between the nucleus and the cytoplasm
PDB structures from and Proteopedia : 3A1J (3D)
 3G65 (3D)
 3GGR (3D)
 Explore the universe of human proteins at neXtProt for HUS1: NX_O60921
REFSEQ proteins: NP_004498.1 ENSEMBL proteins: ENSP00000397836 ENSP00000400727 ENSP00000416588 ENSP00000258774 ENSP00000387961 ENSP00000403844 ENSP00000398806 ENSP00000404348 ENSP00000405175 ENSP00000404855 Human Recombinant Proteins 5 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
HUS1 for ontologies About GeneDecksing Antibodies for HUS1: Assays for HUS1:
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Protein
Domains/ Familiesfor HUS1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
HUS1 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry O60921 ProtoNet protein and cluster: O60921
UniProtKB/Swiss-Prot: HUS1_HUMAN, O60921 Similarity : Belongs to the HUS1 family
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Gene Functionfor HUS1 gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: HUS1_HUMAN, O60921 Function : Component of the 9-1-1 cell-cycle checkpoint response complex that plays a major role in DNA repair. The9-1-1 complex is recruited to DNA lesion upon damage by the RAD17-replication factor C (RFC) clamp loader complex. Acts then as a sliding clamp platform on DNA for several proteins involved in long-patch base excision repair (LP-BER). The 9-1-1 complex stimulates DNA polymerase beta (POLB) activity by increasing its affinity for the 3'-OH end of the primer-template and stabilizes POLB to those sites where LP-BER proceeds; endonuclease FEN1 cleavage activity on substrates with double, nick, or gap flaps of distinct sequences and lengths; and DNA ligase I (LIG1) on long-patch base excision repair substrates
Genatlas biochemistry entry for HUS1 :cell cycle G2 checkpoint control gene,homologous to S pombe Hos1 2 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
HUS1 for ontologies About GeneDecksing Animal Models: 9 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Hus1) :
HUS1 for phenotypes About GeneDecksing
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Pathways & Interactionsfor HUS1 gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
HUS1 for pathways About GeneDecksing 1 Millipore Pathway for HUS1 1 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathway for HUS1 SABiosciences Pathway-Focused PCR Arrays including HUS1 : PAHS-020A PAHS-029A Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for HUS1 SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HUS1 5/21 Interacting proteins for HUS1 (ENSP00000258774 3 O60921 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 21 )About this table 5/11 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 11 ):
About this table
HUS1 for ontologies About GeneDecksing
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Drugs & Compoundsfor HUS1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section
HUS1 for compounds About GeneDecksing Browse Tocris compounds for HUS1 1 Novoseek chemical compound relationship for HUS1 gene
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Transcriptsfor HUS1 gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for HUS1 gene: NM_004507.2
Additional cDNA sequence: AJ227901.1 AK097182.1 AK290459.1 AK294117.1 BC007013.1 BT019481.1 BT019482.1 CR536552.1 CR619988.1 Y16893.1
8 DOTS entries : DT.310408 DT.70103554 DT.92424430 DT.95259816 DT.102823648 DT.92424429 DT.91652334 DT.95362322
24/87 AceView cDNA sequences (see all 87 ):
NM_004507 CR536552 BQ646867 BF222727 AW132130 BX500811 CA418558 BC007013 AI167268 BU193379 CR619988 AI538328 AL554895 R95460 AA828114 AA854956 BE874516 AK097182 AA773515 BF510091 AI962021 AF110393 AA280710 BE891273
highest scoring ESTs for HUS1 :AF076844 AA280710 AA353895 AI968626 BC007013 BE543378 BE568470 BE874516 BE892098 BF185772 Unigene Cluster for HUS1:
HUS1 checkpoint homolog (S. pombe) Hs.152983 [show with all ESTs ] Unigene Representative Sequence: CR619988 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for HUS1 ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11 SP1 :     -       -     -     -       -         SP2 :                         -         SP3 :           -                       SP4 :     -                             SP5 :                                
About this scheme ECgene alternative splicing isoforms for HUS1 11 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000468868 ENST00000445133 ENST00000458191 (uc011kce.1 ) ENST00000432325 ENST00000258774 (uc003tod.1 ) ENST00000441837 ENST00000436444 (uc003toe.1 )ENST00000446009 ENST00000442024 ENST00000433977 ENST00000432627
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Expression for HUS1 gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section HUS1 expression in normal and diseased human tissues 1 / 2 / 3
9 probe-sets matching HUS1 gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
38153_at2 , 3
U95-A
1
1.00
1.00
0.81
0.98
AF076844
1.00
0.90
0.95
1
80446_at2 , 3
U95-E
1
0.88
1.00
0.95
1.12
AI968626
0.80
1.00
0.91
1
80356_r_at2 , 3
U95-E
1
0.44
1.00
0.63
0.93
AW007988
0.40
1.00
0.76
1
204883_s_at2 , 3
U133-A
1
1.00
1.00
--
--
AI968626
0.80
1.00
0.91
1
204884_s_at2 , 3
U133-A
1
0.91
1.00
--
--
NM_004507
0.60
1.00
0.82
1
217618_x_at2 , 3
U133-A
1
0.46
1.00
--
--
AW007988
0.40
1.00
0.76
1
204883_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
204884_s_at2
U133Plus2
1
0.91
1.00
--
--
--
--
--
--
--
217618_x_at2
U133Plus2
1
0.46
1.00
--
--
--
--
--
--
--
About this table
HUS1 for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.152983 Expression variation in blood from EXPOLDB for HUS1
UniProtKB/Swiss-Prot: HUS1_HUMAN, O60921 Tissue specificity : Ubiquitous
SABiosciences Expression via Pathway-Focused PCR Arrays including HUS1 : PAHS-020A PAHS-029A
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Orthologsfor HUS1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for HUS1 gene from 5/14 species (see all 14 )
About this table Species with no ortholog for HUS1 ENSEMBL Gene Tree for HUS1 (if available)
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Paralogsfor HUS1 gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section Paralogs for HUS1 gene HUS1B 2
HUS1 for paralogs About GeneDecksing
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Genomic Variantsfor HUS1 gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 7 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for HUS1 (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for HUS1: --
QIAGEN SeqTarget long-range PCR primers for resequencing HUS1
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Disorders & Mutationsfor HUS1 gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
HUS1 for disorders About GeneDecksing
OMIM: 603760 2 Novoseek disease relationships for HUS1 gene
About this table Human Genome Epidemiology (HuGE) Navigator: HUS1 (7 documents) Export disorders and mutations for HUS1 gene to outside databases
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Medical Newsfor HUS1 gene (Possibly Related Articles in
Doctor's Guide )
About This Section --
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Publicationsfor HUS1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/68 PubMed articles for HUS1 gene, integrated from 7 sources (see all 68 ): (articles sorted by number of sources associating them with HUS1) cDNA cloning and gene mapping of human homologs for Schizosaccharomyces pombe rad17, rad1, and hus1 and cloning of homologs from mouse, Caenorhabditis elegans, and Drosophila melanogaster. (PubMed id 9878245) 1 , 2 , 3, 7 Dean F.B.... O'Donnell M. (1998) Hus1p, a conserved fission yeast checkpoint protein, interacts with Rad1p and is phosphorylated in response to DNA damage. (PubMed id 9524127) 1 , 2 , 3 Kostrub C.F.... Enoch T. (1998) The human checkpoint protein hRad17 interacts with the PCNA-like proteins hRad1, hHus1, and hRad9. (PubMed id 10884395) 1 , 2 , 7 Rauen M.... Karnitz L.M. (2000) HDAC1, a histone deacetylase, forms a complex with Hus1 and Rad9, two G2/M checkpoint Rad proteins. (PubMed id 10846170) 1 , 2 , 7 Cai R.L.... Cohen D. (2000) PCNA interacts with hHus1/hRad9 in response to DNA damage and replication inhibition. (PubMed id 11077446) 1 , 2 , 7 Komatsu K.... Wang H.-G. (2000) The human G2 checkpoint control protein hRAD9 is a nuclear phosphoprotein that forms complexes with hRAD1 and hHUS1. (PubMed id 10359610) 1 , 2 , 7 St Onge R.P.... Davey S. (1999) The J domain of Tpr2 regulates its interaction with the proapoptotic and cell-cycle checkpoint protein, Rad9. (PubMed id 11573955) 1 , 2 , 7 Xiang S.L....Yamamoto K.C. (2001) Interaction and colocalization of Rad9/Rad1/Hus1 checkpoint complex with replication protein A in human cells. (PubMed id 15897895) 1 , 2 , 7 Wu X.... Zou Y. (2005) The human Rad9/Rad1/Hus1 damage sensor clamp interacts with DNA polymerase beta and increases its DNA substrate utilisation efficiency: implications for DNA repair. (PubMed id 15314187) 1 , 2 , 7 Toueille M....Huebscher U. (2004) The human checkpoint sensor and alternative DNA clamp Rad9-Rad1-Hus1 modulates the activity of DNA ligase I, a component of the long-patch base excision repair machinery. (PubMed id 15871698) 1 , 2 Smirnova E.... Huebscher U. (2005)
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External Searches for HUS1 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing HUS1 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing HUS1 gene
(According to HUGE )
About This Section --
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Specialized Databases showing HUS1 gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for HUS1 gene: Search GeneIP for patents involving HUS1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor HUS1 gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
Enzo Life Sciences )About This Section
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