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IGFBP7 Gene

protein-coding   GIFtS: 58

GC04M053850
insulin-like growth factor binding protein 7
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Products    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases & Descriptions
insulin-like growth factor binding protein 71 2     IBP-72 3
MAC251 2 3 5     TAF2 3
IGFBP-71 2 3     PGI2-stimulating factor2 3
PSF1 2 3     insulin-like growth factor-binding protein 72
FSTL21 2     IGFBPRP12
Prostacyclin-stimulating factor2 3     IGFBP-7v2
Tumor-derived adhesion factor2 3     angiomodulin2
IGFBP-rP12 3     AGM2
IGF-binding protein 72 3     MAC25 protein3

External Ids:    HGNC: 54761   Entrez Gene: 34902   Ensembl: ENSG000001634537   UniProtKB: Q162703   

Export aliases for IGFBP7 gene to outside databases

Previous GC identifers: GC04M057701 GC04M057893 GC04M057812 GC04M057738 GC04M057592


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: IBP7_HUMAN, Q16270
Function: Binds IGF-I and IGF-II with a relatively low affinity. Stimulates prostacyclin (PGI2) production. Stimulates
cell adhesion

Gene Wiki entry for IGFBP7

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 60), Regulatory elements and Epigenetics data according to Qiagen and/or SABiosciences)
About This Section

Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the IGFBP7 gene promoter:
         IRF-7A   AP-2alphaA   AP-2gamma   Sox9   IRF-1   ATF   Nkx6-1   FOXJ2 (long isoform)   Lmo2   CUTL1   
         Other transcription factors

   Search SABiosciences Chromatin IP Primers for IGFBP7

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for IGFBP7 


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 4q12   Ensembl cytogenetic band:  4q12   HGNC cytogenetic band: 4q12

IGFBP7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
IGFBP7 gene location

GeneLoc gene densities for chromosome 4         GeneLoc Exon Structure

GeneLoc location for GC04M053850:  view genomic region     (about GC identifiers)

Start:
53,850,818 bp from pter
End:
53,930,079 bp from pter
Size:
79,262 bases
Orientation:
minus strand

1 alternative location:
Chr4- 57,896,939-57,976,551     
RefSeq DNA sequence:
NC_000004.11  NT_022853.15  

(According to 1UniProtKB, neXtProt, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Millipore, Sigma-Aldrich, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, and/or ProSpec,
Biochemical Assays by Millipore, Sigma-Aldrich, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Dec 2010 and Entrez Gene, Antibodies by Millipore, Sigma-Aldrich, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, and/or Epitomics)
About This Section

UniProtKB/Swiss-Prot: IBP7_HUMAN, Q16270 (See protein sequence)
Recommended Name: Insulin-like growth factor-binding protein 7 precursor  
Size: 282 amino acids; 29130 Da
Subunit: May interact with VPS24/CHMP3; the relevance of such interaction however remains unclear
Subcellular location: Secreted
Rna editing: Modified_positions=78, 95; Note=Partially edited. In the brain, position 78 is edited at about 55% and
position 95 at about 31%
Secondary accessions: Q07822 Q53YE6 Q9UCA8

Explore the universe of human proteins at neXtProt for IGFBP7: NX_Q16270 

Post-translational modifications:

  • N-glycosylated1


  • REFSEQ proteins: NP_001544.1  

    ENSEMBL proteins: 
    ENSP00000295666 


    Human Recombinant Proteins 
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich
    R&D Systems Recombinant & Natural Proteins for IGFBP7 (IGFBP-rp1/IGFBP-7)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: IGFBP7
    GenScript Custom Purified and Recombinant Proteins Services for IGFBP7 
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins

    3 Gene Ontology (GO) cellular component terms (GO ID links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005576 extracellular region IEA--
    GO:0005615 extracellular space IDA--
    GO:0031012colocalizes with extracellular matrix IDA--
    About this table

    IGFBP7 for ontologies           About GeneDecksing



    Antibodies for IGFBP7: 
    Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Sigma-Aldrich Antibodies for IGFBP7
    R&D Systems Antibodies for IGFBP7 (IGFBP-rp1/IGFBP-7)
    Browse OriGene Antibodies
    GenScript Custom Superior Antibodies Services for IGFBP7 
    Novus Biologicals Antibodies for IGFBP7
    Browse antibodies at Epitomics

    Assays for IGFBP7: 
    Browse Kits and Assays available from Millipore
    Browse ELISAs at Sigma-Aldrich
    OriGene Custom Immunoassay Development 
    Browse OriGene Fluorogenic Cell Assay Kits 
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for IGFBP7 
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for IGFBP7 


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    IGFBP7 for domains           About GeneDecksing

    5/8 InterPro domains/families (see all 8):
     IPR007110 Ig-like
     IPR002350 Prot_inh_Kazal
     IPR003599 Ig_sub
     IPR013098 Ig_I-set
     IPR013783 Ig-like_fold

    Graphical View of Domain Structure for InterPro Entry Q16270

    ProtoNet protein and cluster: Q16270

    3 Blocks protein families:
    IPB003599 Immunoglobulin subtype
    IPB011497 Protease inhibitor
    IPB013098 Immunoglobulin I-set


    UniProtKB/Swiss-Prot: IBP7_HUMAN, Q16270
    Similarity: Contains 1 Ig-like C2-type (immunoglobulin-like) domain
    Similarity: Contains 1 IGFBP N-terminal domain
    Similarity: Contains 1 Kazal-like domain


    (According to UniProtKB, IUBMB,and/or Genatlas, Animal models from MGI Dec 24 2010,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Millipore, siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich, microRNA from Sigma-Aldrich, Qiagen, SABiosciences, Clones from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, Cell Lines from GenScript, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene.)
    About This Section

    UniProtKB/Swiss-Prot: IBP7_HUMAN, Q16270
    Function: Binds IGF-I and IGF-II with a relatively low affinity. Stimulates prostacyclin (PGI2) production. Stimulates
    cell adhesion

    Inhib.
    RNA:
        
    Browse for Gene Knock-down Tools from Millipore
    Browse Nano Scale siRNA at Sigma-Aldrich
    Sigma-Aldrich siRNA Panels and esiRNA and siRNA for IGFBP7
    Sigma-Aldrich shRNA for IGFBP7
    OriGene 29mer shRNA kits in GFP-retroviral vector: IGFBP7
    OriGene shRNA RFP: IGFBP7
    OriGene basic RS shRNA: IGFBP7
    OriGene siRNA: IGFBP7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of IGFBP7 
    miRNA:Sigma-Aldrich microRNA Mimics for IGFBP7
    Browse microRNA target validation systems at Sigma-Aldrich 
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of IGFBP7 
    Search SABiosciences for Assays for microRNAs that regulate IGFBP7

    Gene
    Editing:
    Browse CompoZr Knockout ZFN at Sigma-Aldrich 

    Clones:Browse Clones for the Expression of Recombinant Proteins Available from Millipore
    Browse iPSC Reprogramming Factors at Sigma-Aldrich
    OriGene GFP tagged cDNA clones in CMV expression vector: IGFBP7
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector: IGFBP7
    OriGene untagged cDNA clones in CMV expression vector: IGFBP7
    OriGene 3'-UTR clone: IGFBP7 
    Browse MicroRNA Expression Plasmids 
    GenScript cDNA clone with any tag delivered in your preferred vector: IGFBP7 
    Browse Sino Biological Human cDNA Clones

    Cell
    Lines:
      
    GenScript Custom overexpressing Cell Line Services for IGFBP7 

    Genatlas biochemistry entry for IGFBP7:
    insuline-like growth factor binding protein 7 (related protein 1),expressed in both in situ and invasive neoplasm and
    increased in senescent cells

    2 Gene Ontology (GO) molecular function terms (GO ID links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005515 protein binding IPI9388210
    GO:0005520 insulin-like growth factor binding IEA--
    About this table

    IGFBP7 for ontologies           About GeneDecksing

    Animal Models: 1 MGI mutant phenotype (inferred from 1 allele(MGI details for Igfbp7):

    no phenotypic analysis

    IGFBP7 for phenotypes           About GeneDecksing


    (Pathways according to Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB, Sets of similar genes according to GeneDecks, PCR Arrays from SABiosciences, Proteins Network according to SABiosciences, Sigma-Aldrich, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene).
    About This Section


    IGFBP7 for pathways           About GeneDecksing

    2 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for  IGFBP7
        Inositol Metabolism
    IGF-1 Signaling

        SABiosciences Pathway-Focused PCR Array including IGFBP7: PAHS-050A 

        Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for IGFBP7
        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for IGFBP7

    5/10 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 10):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001558 regulation of cell growth IEA--
    GO:0007155 cell adhesion IDA8117260
    GO:0007566 embryo implantation IEA--
    GO:0008285 negative regulation of cell proliferation TAS8939990
    GO:0009408 response to heat IEA--
    About this table

    IGFBP7 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    IGFBP7 for compounds           About GeneDecksing

    Browse Small Molecules at Sigma-Aldrich
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for IGFBP7
    9 Novoseek chemical compound relationships for IGFBP7 gene
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    5-aza-2'deoxycytidine 66.9 3 19094461 (1), 17236181 (1), 19638426 (1)
    prostacyclin 63.4 25 8435236 (3), 7980422 (3), 1837513 (3), 8982858 (2) (see all 12)
    agar 35 2 10344746 (1), 17465992 (1)
    txb2 20.9 1 1837513 (1)
    retinoic acid 19 9 7538673 (2), 11295114 (1), 11089538 (1)
    vegf 4.13 2 19374835 (2)
    serine 4.03 1 16420484 (1)
    glucose 0 10 15027891 (3), 9313760 (3), 16873698 (1)
    estrogen 0 5 17545519 (1), 11429696 (1)
    About this table



    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 228 Homo sapiens; Dec 8 2010) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Millipore,
    siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene, microRNA from Sigma-Aldrich, Qiagen, SABiosciences,
    Tagged/untagged cDNA clones from OriGene, Sigma-Aldrich, GenScript, Primers from OriGene and/or SABiosciences)
    About This Section

    Inhib.
    RNA:
         
    Browse for Gene Knock-down Tools from Millipore
    Browse Nano Scale siRNA at Sigma-Aldrich
    Sigma-Aldrich siRNA Panels and esiRNA and siRNA for IGFBP7
    Sigma-Aldrich shRNA for IGFBP7
    OriGene 29mer shRNA kits in GFP-retroviral vector: IGFBP7
    OriGene shRNA RFP: IGFBP7
    OriGene basic RS shRNA: IGFBP7
    OriGene siRNA: IGFBP7
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of IGFBP7 
    miRNA: Sigma-Aldrich microRNA Mimics for IGFBP7
    Browse microRNA target validation systems at Sigma-Aldrich 
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of IGFBP7 
    Search SABiosciences for Assays for microRNAs that regulate IGFBP7
    Clones: Browse FLAG tag genes at Sigma-Aldrich
    OriGene GFP tagged cDNA clones in CMV expression vector: IGFBP7
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector: IGFBP7
    OriGene untagged cDNA clones in CMV expression vector: IGFBP7
    OriGene 3'-UTR Clone: IGFBP7 
    Browse OriGene MicroRNA Expression Plasmids 
    GenScript cDNA clone with any tag delivered in your preferred vector: IGFBP7 
    Primers: OriGene genome-wide validated SYBR primer pairs: IGFBP7
    Browse OriGene validated miRNA SYBR primer pairs 
    SABiosciences RT2 qPCR Primer Assay for IGFBP7: PPH05831A

    REFSEQ mRNAs for IGFBP7 gene: 

    NM_001553.1  

    Additional cDNA sequence: 

    AF540057.1 AK303915.1 AK316082.1 BC017201.2 BC066339.1 BT006654.1 BX648756.1 CR599263.1 
    CR607474.1 CR612946.1 CR615138.1 CR619194.1 CR619713.1 CR626227.1 L19182.1 S75725.1 

    24/26 DOTS entries (see all 26):

    DT.95170564  DT.97760173  DT.40205446  DT.92040454  DT.100045783  DT.95170547  DT.95170563  DT.91955903 
    DT.92413462  DT.100674865  DT.100674866  DT.95170568  DT.100674872  DT.121219229  DT.121219282  DT.121219324 
    DT.121219400  DT.95104371  DT.95313534  DT.97812821  DT.118707  DT.121219304  DT.451262  DT.91980279 

    24/688 AceView cDNA sequences (see all 688):

    BU948156 CD679099 CA952677 BF056097 AA557124 AA730101 AW517171 BM314525 
    CA942661 AW074676 CA447588 BU730944 BQ773909 BF725225 CD517905 AA653623 
    AI923605 AW572072 AA151485 BM673354 BM091458 AW192242 AI138712 AI755056 

    highest scoring ESTs for IGFBP7:

    L19182 AA341077 BF967200 BG495848 BI909939 BM509054 BM689029 BQ948560 CN481182 CN481391 

    Unigene Cluster for IGFBP7:

    Insulin-like growth factor binding protein 7
    Hs.479808  [show with all ESTs]
    Unigene Representative Sequence: BX648756


    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for IGFBP7

    ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b
    SP1:                                            -     -               
    SP2:                    -     -                 -     -               
    SP3:                                                                  
    SP4:                    -                                             

    About this scheme

    ECgene alternative splicing isoforms for IGFBP7
    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000295666(uc003hcn.2 uc011cag.1)

    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 228 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Primers from OriGene and/or SABiosciences )
    About This Section

    IGFBP7 expression in normal and diseased human tissues

    1  / 2  / 3

    5 probe-sets matching IGFBP7 gene

    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    2062_at2, 3 U95-A 1 0.56 1.00 1.00 1.00 L19182 1.00 0.90 0.95 1
    201162_at2, 3 U133-A 1 0.82 1.00 -- -- NM_001553 0.60 1.00 0.82 1
    201163_s_at2, 3 U133-A 1 0.73 1.00 -- -- NM_001553 0.60 1.00 0.82 1
    201162_at2 U133Plus2 1 0.82 1.00 -- -- -- -- -- -- --
    201163_s_at2 U133Plus2 1 0.73 1.00 -- -- -- -- -- -- --
    About this table

    IGFBP7 for expression           About GeneDecksing

    Data from Genenote  (Publications) and GNF BioGPS
        About these images
    IGFBP7 gene expression
    IGFBP7 gene electronic northern expression
    IGFBP7 gene sage expression
    About these images

    CGAP SAGE TAG: CATATCATTA TTTCCTTCAT

    SOURCE GeneReport for Unigene cluster: Hs.479808

    Expression variation in blood from EXPOLDB for IGFBP7

    Primers: OriGene genome-wide validated SYBR primer pairs: IGFBP7
    Browse OriGene validated miRNA SYBR primer pairs 
    SABiosciences RT2 qPCR Primer Assay for IGFBP7: PPH05831A
        SABiosciences Expression via Pathway-Focused PCR Array including IGFBP7: PAHS-050A 


    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Dec 24 2010, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section

    Orthologs for IGFBP7 gene from 5/7 species (see all 7)
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    IGFBP71   -- insulin-like growth factor binding protein 7 95.04(n)
    93.97(a)
    608559  XM_845177.1  XP_850270.1 
    chimpanzee
    (Pan troglodytes)
    IGFBP71   -- insulin-like growth factor binding protein 7 99.43(n)
    100(a)
    461304  XM_517274.2  XP_517274.2 
    cow
    (Bos taurus)
    IGFBP71   -- insulin-like growth factor binding protein 7 95.39(n)
    95.74(a)
    616368  XM_868373.2  XP_873466.2 
    rat
    (Rattus norvegicus)
    Igfbp71   -- insulin-like growth factor binding protein 7 91.22(n)
    91.1(a)
    289560  NM_001013048.1  NP_001013066.1 
    mouse
    (Mus musculus)
    Igfbp71 , 5 5 (41.71 cM)5
    insulin-like growth factor binding protein 71, 5 90.87(n)1
    90.75(a)1
    298171  NM_008048.21  NP_032074.21 
     AA2009375  AB0128865  (see all 20)
    About this table        Species with no ortholog for IGFBP7

    ENSEMBL Gene Tree for IGFBP7 (if available)

    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section
    Paralogs for IGFBP7 gene
    KAZALD12  IGFBPL12  

    IGFBP7 for paralogs           About GeneDecksing



    (SNPs according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
    About This Section

    10/1109 NCBI SNPs in IGFBP7 are shown (see all 1109)
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidChr 4 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ----------
    rs8768581,2
    C,F,A,57914919(+) CACTCC/GCCAGC 1 -- int117Minor allele frequency- G:0.33NA EA NS WA 1250
    rs8813821,2
    C,F,A,H,57917346(-) TCATCC/ACCTTC 1 -- int1 trp39Minor allele frequency- A:0.27NS EA NA WA 626
    rs10546531,2
    F57897871(-) GTCAAG/ACCATG 1 -- int11Minor allele frequency- A:0.01MN 186
    rs10647981,2
    --57935845(-) TTtttG/Ttttgt 1 -- int10--------
    rs11116261,2
    C,A,H,57953240(+) GAGACG/CGACAC 1 -- int17Minor allele frequency- C:0.07NA WA 14
    rs11116271,2
    C,H,57953550(+) ACTAAC/TGAAGG 1 -- int17Minor allele frequency- T:0.06NA 84
    rs11116281,2
    C,F,A,H,57953687(+) AGTCCG/CTGGGC 1 -- int113Minor allele frequency- C:0.07NS EA NA WA 552
    rs11116291,2
    C,H,57953774(+) TATACA/GCAAGG 1 -- int18Minor allele frequency- G:0.10NA WA 136
    rs11332431,2
    --57976234(-) GCGGAA/GGGGTA 2 K R ref1 mis1 ese31Minor allele frequency- G:0.00MN 184
    rs12772721,2
    C,F,A,H,57909388(-) CCCAGG/ACTGCC 1 -- int130Minor allele frequency- A:0.20EA NA NS MN WA 2120
    About this table

    HapMap Linkage Disequilibrium images for IGFBP7 (up to first 250kb)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
          Database of Genomic Variants (DGV) variations for IGFBP7: --

    QIAGEN SeqTarget long-range PCR primers for resequencing IGFBP7 

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, LSDB, HGMD, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    IGFBP7 for disorders           About GeneDecksing

    OMIM: 602867

    10/24 Novoseek disease relationships for IGFBP7 gene (see all 24)

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    diabetic angiopathies 56.9 2 8674874 (2)
    bladder carcinoma 36.7 2 17465992 (1), 14521955 (1)
    tumors 32.3 45 17136345 (4), 11429696 (4), 10344746 (2), 18701096 (2) (see all 21)
    colon cancer 29.8 5 18981723 (1), 17334979 (1), 17465992 (1), 9605951 (1)
    colorectal cancer 29.4 14 19094461 (6), 18701096 (3), 15027891 (2), 17136345 (1) (see all 5)
    prostate cancer 28.5 22 14633696 (6), 10344746 (3), 10383131 (3), 9851777 (1) (see all 7)
    benign prostatic hyperplasia 21.4 1 14633696 (1)
    breast cancer 19.3 12 17634530 (4), 15979304 (2), 11295114 (1), 9449045 (1) (see all 7)
    cancer 16.8 13 15027891 (4), 8939990 (1), 11295114 (1), 11400113 (1) (see all 8)
    meningioma 11 2 11089538 (1), 7538673 (1)
    About this table

    1 PharmGKB disease relationship for IGFBP7 gene
    Disease PharmGKB Relations PubMed IDs for articles supporting these relationships
    Leukemia, Lymphocytic, Acute, L1FA  GN  12086872 12730115
    About this table

    Genetic Association Database (GAD): IGFBP7
    Human Genome Epidemiology (HuGE) Navigator: IGFBP7 (2 documents)

    Export disorders and mutations for IGFBP7 gene to outside databases

    (Possibly Related Articles in Doctor's Guide)
    About This Section
      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6UniProtKB/TrEMBL, and/or 7Novoseek)
    About This Section

    10/122 PubMed articles for IGFBP7 gene, integrated from 7 sources (see all 122):
    (articles sorted by number of sources associating them with IGFBP7)
    1. Purification and molecular cloning of prostacyclin-stimulating factor from serum-free conditioned medium of human diploid fibroblast cells. (PubMed id 7980422)1, 2, 3, 7 Yamauchi T....Nawata H. (1994)
    2. Identification and characterization of genes differentially expressed in meningiomas. (PubMed id 7694637)1, 2, 3 Murphy M.... George D.L. (1993)
    3. Synthesis and characterization of insulin-like growth factor-binding protein (IGFBP)-7. Recombinant human mac25 protein specifically binds IGF-I and -II. (PubMed id 8939990)1, 2, 7 Oh Y....Rosenfeld R.G. (1996)
    4. Genetic association analysis of the IGFBP7, ADAMTS3, and IL8 genes as the potential osteoarthritis susceptibility that maps to chromosome 4q. (PubMed id 15708897)1, 4 Kawahara C....Loughlin J. (2005)
    5. Signal peptide prediction based on analysis of experimentally verified cleavage sites. (PubMed id 15340161)1, 2 Zhang Z. and Henzel W.J. (2004)
    6. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    7. Interaction of IGF-binding protein-related protein 1 with a novel protein, neuroendocrine differentiation factor, results in neuroendocrine differentiation of prostate cancer cells. (PubMed id 11549700)1, 2 Wilson E.M.... Rosenfeld R.G. (2001)
    8. Cell adhesion activity of a 30-kDa major secreted protein from human bladder carcinoma cells. (PubMed id 8117260)1, 2 Akaogi K.... Miyazaki K. (1994)
    9. Circulating IGF-binding protein 7 (IGFBP7) levels are elevated in patients with endometriosis or undergoing diabetic hemodialysis. (PubMed id 19019211)1, 7 Kutsukake M....Tamura K. (2008)
    10. Immunohistochemical study of prostacyclin-stimulating factor (PSF) in the diabetic and atherosclerotic human coronary artery. (PubMed id 9313760)1, 7 Sekiguchi N....Nawata H. (1997)

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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 3490 HGNC: 5476 AceView: IGFBP7 Ensembl:ENSG00000163453 euGenes: HUgn3490
    ECgene: IGFBP7 H-InvDB: IGFBP7

    (According to HUGE)
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    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
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    NameDescription
    ATLAS Chromosomes in Cancer entry for IGFBP7 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/igfbp7/

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