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MT-ATP8 Gene

protein-coding   GIFtS: 29

GCMTP008368
mitochondrially encoded ATP synthase 8
(Previous name: ATP synthase 8 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: MTATP8)
Products    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
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Aliases & Descriptions
mitochondrially encoded ATP synthase 81     ATPase82
ATP81 2 3     ATP synthase F0 subunit 82
A6L1 3     F-ATPase subunit 83
MTATP82 3     ATPASE83
ATP synthase 81     

External Ids:    HGNC: 74151   Entrez Gene: 45092   Ensembl: ENSG000002282537   UniProtKB: P039283   

Export aliases for MT-ATP8 gene to outside databases

Previous GC identifer: GC00U921583


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: ATP8_HUMAN, P03928
Function: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the
presence of a proton gradient across the membrane which is generated by electron transport complexes of the
respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic
core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk.
During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk
subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the
membrane (By similarity)

Gene Wiki entry for MT-ATP8

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 60), Regulatory elements and Epigenetics data according to Qiagen and/or SABiosciences)
About This Section

Regulatory elements:
   Search SABiosciences Regulatory transcription factor binding sites for MT-ATP8
         Other transcription factors

   Search SABiosciences Chromatin IP Primers for MT-ATP8

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays 


Genomic Location:
Chromosome:MT   

HGNC chromosome: mitochondria

GeneLoc gene densities for chromosome MT         GeneLoc Exon Structure

GeneLoc location for GCMTP008368:  view genomic region     (about GC identifiers)

Start:
8,366 bp from pter
End:
8,572 bp from pter
Size:
207 bases
Orientation:
minus strand

(According to 1UniProtKB, neXtProt, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Millipore, Sigma-Aldrich, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, and/or ProSpec,
Biochemical Assays by Millipore, Sigma-Aldrich, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Dec 2010 and Entrez Gene, Antibodies by Millipore, Sigma-Aldrich, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, and/or Epitomics)
About This Section

UniProtKB/Swiss-Prot: ATP8_HUMAN, P03928 (See protein sequence)
Recommended Name: ATP synthase protein 8  
Size: 68 amino acids; 7992 Da
Subunit: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel (By
similarity)
Subcellular location: Mitochondrion membrane; Single-pass membrane protein
Secondary accessions: Q34771

Explore the universe of human proteins at neXtProt for MT-ATP8: NX_P03928 

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2




  • ENSEMBL proteins: 
    ENSP00000355265 


    Human Recombinant Proteins 
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    5/6 Gene Ontology (GO) cellular component terms (GO ID links to tree view) (see all 6):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) NAS--
    GO:0005739 mitochondrion IEA--
    GO:0005743 mitochondrial inner membrane EXP4517936
    GO:0005753 mitochondrial proton-transporting ATP synthase complex IDA12110673
    GO:0016020 membrane IEA--
    About this table

    MT-ATP8 for ontologies           About GeneDecksing



    Antibodies for MT-ATP8: 
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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    MT-ATP8 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001421 ATPase_F0-cplx_su8_mt_metazoan

    Graphical View of Domain Structure for InterPro Entry P03928

    ProtoNet protein and cluster: P03928

    1 Blocks protein family: IPB001421 Mitochondrial ATPase

    UniProtKB/Swiss-Prot: ATP8_HUMAN, P03928
    Similarity: Belongs to the ATPase protein 8 family


    (According to UniProtKB, IUBMB,and/or Genatlas, Animal models from MGI Dec 24 2010,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Millipore, siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich, microRNA from Sigma-Aldrich, Qiagen, SABiosciences, Clones from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, Cell Lines from GenScript, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene.)
    About This Section

    UniProtKB/Swiss-Prot: ATP8_HUMAN, P03928
    Function: Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the
    presence of a proton gradient across the membrane which is generated by electron transport complexes of the
    respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic
    core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk.
    During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk
    subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the
    membrane (By similarity)

    Inhib.
    RNA:
        
    Browse for Gene Knock-down Tools from Millipore
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    miRNA:Browse microRNA Mimics at Sigma-Aldrich
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of MT-ATP8 
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    Gene
    Editing:
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    Cell
    Lines:
      
    GenScript Custom overexpressing Cell Line Services for MT-ATP8 

    3 Gene Ontology (GO) molecular function terms (GO ID links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0015078 hydrogen ion transmembrane transporter activity IEA--
    GO:0016887contributes to ATPase activity IDA12110673
    GO:0022857 transmembrane transporter activity IC12110673
    About this table

    MT-ATP8 for ontologies           About GeneDecksing


    (Pathways according to Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB, Sets of similar genes according to GeneDecks, PCR Arrays from SABiosciences, Proteins Network according to SABiosciences, Sigma-Aldrich, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene).
    About This Section


    MT-ATP8 for pathways           About GeneDecksing

    5 Kegg Pathways  (Kegg details for MT-ATP8):
        hsa00190 Oxidative phosphorylation
    hsa01100 Metabolic pathways
    hsa05010 Alzheimer's disease
    hsa05012 Parkinson's disease
    hsa05016 Huntington's disease

        SABiosciences Custom Pathway-Focused PCR Arrays for MT-ATP8 

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for MT-ATP8

    5/20 Interacting proteins for MT-ATP8 (ENSP000003552653) via UniProtKB, MINT, and/or STRING (see all 20)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PPA1ENSP000003623293STRING: ENSP00000362329
    PPA2ENSP000003499963STRING: ENSP00000349996
    ATPIF1ENSP000003352033STRING: ENSP00000335203
    LHPPENSP000003578353STRING: ENSP00000357835
    ATP5C1ENSP000003491423STRING: ENSP00000349142
    About this table

    5 Gene Ontology (GO) biological process terms (GO ID links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006811 ion transport IEA--
    GO:0015986 ATP synthesis coupled proton transport NAS--
    GO:0022904 respiratory electron transport chain TAS--
    GO:0042776 mitochondrial ATP synthesis coupled proton transport TAS--
    GO:0055093 response to hyperoxia IEA--
    About this table

    MT-ATP8 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    MT-ATP8 for compounds           About GeneDecksing

    Browse Small Molecules at Sigma-Aldrich
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for MT-ATP8
    2 Novoseek chemical compound relationships for MT-ATP8 gene
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    nadh 53.9 5 19066432 (1), 16861209 (1), 15855057 (1), 17619138 (1) (see all 5)
    rrna 46.5 3 17464880 (1)
    About this table



    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 228 Homo sapiens; Dec 8 2010) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Millipore,
    siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene, microRNA from Sigma-Aldrich, Qiagen, SABiosciences,
    Tagged/untagged cDNA clones from OriGene, Sigma-Aldrich, GenScript, Primers from OriGene and/or SABiosciences)
    About This Section

    Inhib.
    RNA:
         
    Browse for Gene Knock-down Tools from Millipore
    Browse Nano Scale siRNA at Sigma-Aldrich
    Browse siRNA at Sigma-Aldrich
    Browse shRNA at Sigma-Aldrich
    OriGene 29mer shRNA kits in GFP-retroviral vector: MT-ATP8
    OriGene shRNA RFP: MT-ATP8
    OriGene basic RS shRNA: MT-ATP8
    Browse OriGene siRNA
    Search QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of MT-ATP8 
    miRNA: Browse microRNA Mimics at Sigma-Aldrich
    Browse microRNA target validation systems at Sigma-Aldrich 
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of MT-ATP8 
    Search SABiosciences for Assays for microRNAs that regulate MT-ATP8
    Clones: Browse FLAG tag genes at Sigma-Aldrich
    Browse OriGene untagged/tagged cDNA clones in CMV expression vector
    Browse 3'-UTR reporter clones for miRNA target validation 
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    Primers:Browse OriGene genome-wide validated SYBR primer pairs
    Browse OriGene validated miRNA SYBR primer pairs 
    Search SABiosciences RT2 qPCR Primer Assays for MT-ATP8


    GeneLoc Exon Structure

    1 Ensembl transcript including schematic representation, and UCSC links where relevant:
    ENST00000361851

    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 228 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Primers from OriGene and/or SABiosciences )
    About This Section

    MT-ATP8 expression in normal and diseased human tissues

    Data from GNF BioGPS
        About these images

    MT-ATP8 gene expression
    MT-ATP8 gene electronic northern expression
    MT-ATP8 gene sage expression
    About these images

    CGAP SAGE TAG: --
    Primers:Browse OriGene genome-wide validated SYBR primer pairs
    Browse OriGene validated miRNA SYBR primer pairs 
    Search SABiosciences RT2 qPCR Primer Assays for MT-ATP8
        SABiosciences Custom PCR Arrays for MT-ATP8 


    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Dec 24 2010, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section

    Orthologs for MT-ATP8 gene from 1 species
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    chimpanzee
    (Pan troglodytes)
    ATP81   -- ATP synthase F0 subunit 8 91.18(n)
    92.65(a)
    807862  ATP8_5835123  NP_008190.1 
    About this table        Species with no ortholog for MT-ATP8

    ENSEMBL Gene Tree for MT-ATP8 (if available)

    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section
      --

    (SNPs according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
    About This Section
    Search QIAGEN SeqTarget long-range PCR primers for resequencing for MT-ATP8 

    (in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, LSDB, HGMD, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    MT-ATP8 for disorders           About GeneDecksing

    OMIM: 516070

    Human Gene Mutation Database (HGMD): MT-ATP8
    Genetic Association Database (GAD): MT-ATP8

    Export disorders and mutations for MT-ATP8 gene to outside databases

    (Possibly Related Articles in Doctor's Guide)
    About This Section
      --

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6UniProtKB/TrEMBL, and/or 7Novoseek)
    About This Section

    10/41 PubMed articles for MT-ATP8 gene, integrated from 7 sources (see all 41):
    (articles sorted by number of sources associating them with MT-ATP8)
    1. Polymorphisms in the coding region of mtDNA and effects on clinical outcome of unrelated bone marrow transplantation. (PubMed id 11607774)1, 4 Ishikawa Y....Juji T. (2001)
    2. Sequence and organization of the human mitochondrial genome. (PubMed id 7219534)1, 2 Anderson S.... Young I.G. (1981)
    3. Investigation on mitochondrial tRNA(Leu/Lys), NDI and ATPase 6/8 in Iranian multiple sclerosis patients. (PubMed id 17619138)1, 7 Ahari S.E....Bahar M.A. (2007)
    4. Mitochondrial tRNALeu/Lys and ATPase 6/8 gene variations in spinocerebellar ataxias. (PubMed id 19066432)1, 7 Safaei S....Shariati P. (2009)
    5. A human MAP kinase interactome. (PubMed id 20936779)1 Bandyopadhyay S....Ideker T. (2010)
    6. Lysine acetylation targets protein complexes and co-regulates major cellular functions. (PubMed id 19608861)2 Choudhary C.... Mann M. (2009)
    7. MtSNPscore: a combined evidence approach for assessin g cumulative impact of mitochondrial variations in disease. (PubMed id 19758471)1 Bhardwaj A....Tiwari S. (2009)
    8. Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians. (PubMed id 14760490)2 Coble M.D.... Parsons T.J. (2004)
    9. Mitochondrial genome variation and evolutionary history of Australian and New Guinean aborigines. (PubMed id 12840039)2 Ingman M. and Gyllensten U. (2003)
    10. Lineage-specific selection in human mtDNA: lack of polymorphisms in a segment of MTND5 gene in haplogroup J. (PubMed id 12949126)2 Moilanen J.S.... Majamaa K. (2003)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
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      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 4509 HGNC: 7415 Ensembl:ENSG00000228253 euGenes: HUgn4509 ECgene: MT-ATP8 Kegg: 4509
    H-InvDB: MT-ATP8

    (According to HUGE)
    About This Section
      --

    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
      --

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from XenneX, Inc.)
    About This Section
    Patent Information for MT-ATP8 gene:
    Search GeneIP for patents involving MT-ATP8

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays by Millipore, Sigma-Aldrich, R&D Systems, Qiagen, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Epitomics, ProSpec, Uscn,
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