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Aliases & Descriptionsfor PIGG gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section Aliases & Descriptions phosphatidylinositol glycan anchor biosynthesis, class G1 2 RLGS19302 GPI71 2 3 PRO44052 phosphatidylinositol glycan, class G1 2 MGC1319032 LAS211 2 DKFZp434M11312 FLJ202651 2 DKFZp434A18102 Phosphatidylinositol-glycan biosynthesis class G protein2 3 FLJ399252 PIG-G2 3 DKFZp434C17122 hGPI72 3 GPI ethanolamine phosphate transferase 22 GPI7 homolog2 3 EC 2.-.-.-3 OTTHUMP000002165872
Export aliases for PIGG gene to outside databases
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Summariesfor PIGG gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section UniProtKB/Swiss-Prot: PIGG_HUMAN, Q5H8A4 Function : Ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfersethanolamine phosphate to the GPI second mannose
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Genomic Viewsfor PIGG gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 60) ,
Regulatory elements and Epigenetics data according to
Qiagen and/or
SABiosciences )About This Section Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the PIGG gene promoter: TBP TFIID CP1A NF-YA NF-Y CP1C FAC1 C/EBPalpha c-Myb CUTL1 Other transcription factors Search SABiosciences Chromatin IP Primers for PIGG Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for PIGG
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 4p16.3 Ensembl cytogenetic band: 4p16.3 HGNC cytogenetic band: 4p16.3 PIGG Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure
GeneLoc location for GC04P000486: view genomic region
(about GC identifiers )
Start:
464,465 bp from pter
End:
533,985 bp from pter
Size:
69,521 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000004.11 NT_037622.5
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Proteinsfor PIGG gene
(According to
1 UniProtKB ,
neXtProt ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological , and/or
ProSpec ,
Biochemical Assays by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Dec 2010 and
Entrez Gene ,
Antibodies by
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals , and/or
Epitomics )
About This Section UniProtKB/Swiss-Prot: PIGG_HUMAN, Q5H8A4 (See
protein sequence )Recommended Name: GPI ethanolamine phosphate transferase 2 Size : 983 amino acids; 108173 Da
Subunit : Forms a complex with PIGF. PIGF is required to stabilize it. Competes with PIGO for the binding of PIGF
Subcellular location : Endoplasmic reticulum membrane; Multi-pass membrane protein
Sequence caution : Sequence=AAQ88902.1; Type=Erroneous termination; Positions=311; Note=Translated as Gln;Sequence=BAA91046.1; Type=Erroneous initiation; Sequence=BAB55130.1; Type=Erroneous initiation;
Secondary accessions : Q2TAK5 Q6UX31 Q7L5Y4 Q8N866 Q8NCC9 Q96SY9 Q9BVT7 Q9NXG5Alternative splicing : 5 isoforms : Q5H8A4-1 Q5H8A4-2 Q5H8A4-3 Q5H8A4-4 Q5H8A4-5 Explore the universe of human proteins at neXtProt for PIGG: NX_Q5H8A4 Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001120650.1 NP_060203.3 ENSEMBL proteins: ENSP00000372494 ENSP00000426002 ENSP00000296306 ENSP00000422410 ENSP00000311750 ENSP00000427069 ENSP00000415203 ENSP00000423596 ENSP00000424800 ENSP00000424619 ENSP00000394941 ENSP00000421550 Human Recombinant Proteins 4 Gene Ontology (GO) cellular component terms (GO ID links to tree view) :
About this table
PIGG for ontologies About GeneDecksing Antibodies for PIGG: Assays for PIGG:
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Protein
Domains/ Familiesfor PIGG gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
PIGG for domains About GeneDecksing 3 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q5H8A4 ProtoNet protein and cluster: Q5H8A4
UniProtKB/Swiss-Prot: PIGG_HUMAN, Q5H8A4 Similarity : Belongs to the PIGG/PIGN/PIGO family. PIGG subfamily
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Gene Functionfor PIGG gene
(According to UniProtKB ,
IUBMB ,and/or
Genatlas , Animal models from MGI Dec 24 2010,
shRNA from
OriGene ,
Sigma-Aldrich ,
RNAi from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Clones from Millipore ,
Sigma-Aldrich ,
OriGene ,
GenScript ,
Sino Biological ,
Cell Lines from GenScript ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene .)
About This Section UniProtKB/Swiss-Prot: PIGG_HUMAN, Q5H8A4 Function : Ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfersethanolamine phosphate to the GPI second mannose Enzyme Number (IUBMB): EC 2.-.-.-
5 Gene Ontology (GO) molecular function terms (GO ID links to tree view) :
About this table
PIGG for ontologies About GeneDecksing
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Pathways & Interactionsfor PIGG gene
(Pathways according to
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
PCR Arrays from
SABiosciences ,
Proteins Network according to
SABiosciences ,
Sigma-Aldrich ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Dec 2010 via
Entrez Gene) .
About This Section
PIGG for pathways About GeneDecksing 3 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for PIGG 1 Kegg Pathway (Kegg details for PIGG) : hsa00563 Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
UniProtKB/Swiss-Prot: PIGG_HUMAN, Q5H8A4 Pathway : Glycolipid biosynthesis; glycosylphosphatidylinositol-anchor biosynthesis SABiosciences Custom Pathway-Focused PCR Arrays for PIGG Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for PIGG Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for PIGG 5/7 Interacting proteins for PIGG (ENSP00000372494 3 ) via UniProtKB, MINT, and/or STRING (see all 7 )
About this table 5/6 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 6 ):
About this table
PIGG for ontologies About GeneDecksing
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Drugs & Compoundsfor PIGG gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
About This Section Browse Tocris compounds for PIGG
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Transcriptsfor PIGG gene (GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 228 Homo sapiens; Dec 8 2010) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
Millipore ,
siRNAs from
Sigma-Aldrich ,
OriGene ,
Qiagen ,
Super-pooled esiRNAs from Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
microRNA from Sigma-Aldrich ,
Qiagen ,
SABiosciences ,
Tagged/untagged cDNA clones from
OriGene ,
Sigma-Aldrich ,
GenScript ,
Primers from
OriGene and/or
SABiosciences )About This Section REFSEQ mRNAs for PIGG gene (2 alternative transcripts): NM_001127178.1 NM_017733.3
Additional cDNA sequence: AB162713.1 AK000272.1 AK027465.1 AK074715.1 AK074815.1 AK097244.1 AK124537.1 AK296507.1 AK309107.1 AL137741.1 AL162084.1 AY358538.1 BC000937.2 BC001249.1 BC050262.1 BC110878.1 BC144576.1 CR619317.1
24/25 DOTS entries (see all 25 ): DT.91928988 DT.411539 DT.213084 DT.100775750 DT.425388 DT.91746356 DT.100745115 DT.40276263
DT.121227532 DT.102831542 DT.100044190 DT.86846644 DT.97768962 DT.86856239 DT.91986634 DT.95356170 DT.102831543 DT.121227452 DT.121227486 DT.121227547 DT.40130531 DT.95147745 DT.97789776 DT.91954556 24/161 AceView cDNA sequences (see all 161 ):
AW268135 AK097244 BQ774237 F02060 AW614790 AI471556 AI560517 BM455257 CR619317 Z41088 AK074715 BE440149 BC000937 AW239182 BQ001548 BU634386 AK000272 CK300616 BC001249 BU191836 AL698226 BM831504 CA397074 AL162084
highest scoring ESTs for PIGG :AI089774 AA455090 AA703436 AA935093 AA937505 AI281604 AI337875 AI363093 AI376876 AI750006 Unigene Cluster for PIGG:
Phosphatidylinositol glycan anchor biosynthesis, class G Hs.7099 [show with all ESTs ] Unigene Representative Sequence: AK124537 GeneLoc Exon Structure 5/18 Alternative Splicing Database (ASD) splice patterns (SP) for PIGG (see all 18 ) ExUns: 1a · 1b · 1c · 1d · 1e ^ 2a · 2b · 2c ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b · 10c · 10d ^ 11 ^ 12 ^ 13a · 13b · SP1 :             -   -       -   -                     -       -   -   SP2 :             -   -       -   -                           -   -   SP3 :           -   -   -       -   -                           -   -   SP4 :             -   -       -   -                 -   -   -     -       SP5 :                     -   -                              
ExUns: 13c · 13d ^ 14a · 14b ^ 15a · 15b · 15c ^ 16a · 16b · 16c ^ 17a · 17b · 17c ^ 18a · 18b ^ 19a · 19b ^ 20a · 20b SP1 : -   -       -   -   -   -     -         -   -           SP2 : -   -       -   -   -   -     -         -   -           SP3 : -   -       -   -   -   -     -         -   -           SP4 :                                       SP5 :                                      
About this scheme ECgene alternative splicing isoforms for PIGG 18/29 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 29 ): ENST00000383028 ENST00000502311 ENST00000503111 (uc003gam.2 ) ENST00000515237 ENST00000507493 ENST00000506898 ENST00000514953 ENST00000508669 ENST00000296306 ENST00000513192 ENST00000510235 ENST00000503261 ENST00000310340 (uc003gaj.3 )ENST00000513239 ENST00000511247 ENST00000504187 ENST00000515624 ENST00000453061 (uc003gak.3 uc010ibf.2 uc003gal.3 )
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Expression for PIGG gene
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 228 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Primers from
OriGene and/or
SABiosciences
)
About This Section PIGG expression in normal and diseased human tissues 1 / 2 / 3
5 probe-sets matching PIGG gene
Affymetrix probe-set
Array
GeneAnnot data
GeneNote data
GeneTide data
# genes
Sensitivity
Specificity
Correlation
Length
Gb_Accession
Consensus
Uniqueness
Score
Rank
67530_at2 , 3
U95-D
1
1.00
1.00
0.84
0.89
AI521101
0.60
1.00
0.82
1
54124_at2 , 3
U95-B
1
1.00
1.00
0.94
1.11
AI089774
1.00
1.00
1.00
1
218652_s_at2 , 3
U133-A
1
1.00
1.00
--
--
NM_017733
0.60
1.00
0.82
1
218652_s_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
1563842_at2
U133Plus2
1
1.00
1.00
--
--
--
--
--
--
--
About this table
PIGG for expression About GeneDecksing Data from
Genenote  
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CTTAAAGTCT SOURCE GeneReport for Unigene cluster: Hs.7099 SABiosciences Custom PCR Arrays for PIGG
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Orthologsfor PIGG gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Dec 24 2010,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
About This Section
Orthologs for PIGG gene from 5/14 species (see all 14 )
About this table Species with no ortholog for PIGG ENSEMBL Gene Tree for PIGG (if available)
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Paralogsfor PIGG gene (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section --
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Genomic Variantsfor PIGG gene (SNPs according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Resequencing Primers from Qiagen )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Chr 4 pos Sequence Recs AA Chg Type More Recs Allele freq Pop Total sample More
About this table HapMap Linkage Disequilibrium images for PIGG (up to first 250kb)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for PIGG: --
QIAGEN SeqTarget long-range PCR primers for resequencing PIGG
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Disorders & Mutationsfor PIGG gene
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
LSDB, HGMD, GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
PIGG for disorders About GeneDecksing Human Genome Epidemiology (HuGE) Navigator: PIGG (3 documents) Export disorders and mutations for PIGG gene to outside databases
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Medical Newsfor PIGG gene (Possibly Related Articles in
Doctor's Guide )
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Publicationsfor PIGG gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 UniProtKB/TrEMBL , and/or
7 Novoseek )
About This Section 10/11 PubMed articles for PIGG gene, integrated from 7 sources (see all 11 ): (articles sorted by number of sources associating them with PIGG) GPI7 is the second partner of PIG-F and involved in modification of glycosylphosphatidylinositol. (PubMed id 15632136) 1 , 2 , 3 Shishioh N.... Kinoshita T. (2005) Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PubMed id 16303743) 1 , 2 Otsuki T....Isogai T. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309) 1 , 2 Clark H.F.... Gray A.M. (2003) Assessment of a polymorphism of SDK1 with hypertensio n in Japanese Individuals. (PubMed id 19851296) 1 Oguri M....Yamada Y. (2010) Association of genetic variants with hemorrhagic stro ke in Japanese individuals. (PubMed id 20198315) 1 Yoshida T....Yamada Y. (2010) Association of gene polymorphisms with chronic kidney disease in Japanese individuals. (PubMed id 19724895) 1 Yoshida T....Yamada Y. (2009) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for PIGG gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing PIGG gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing PIGG gene
(According to HUGE )
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Specialized Databases showing PIGG gene (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for PIGG gene: Search GeneIP for patents involving PIGG GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor PIGG gene (Antibodies, recombinant proteins, and assays by Millipore , Sigma-Aldrich , R&D Systems , Qiagen , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Epitomics , ProSpec , Uscn , Clones available from Millipore , Sigma-Aldrich , OriGene , GenScript , Sino Biological , PCR Arrays from SABiosciences , Drugs and/or compounds by Sigma-Aldrich , Tocris Bioscience , and/or
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