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PIK3CA Gene

protein-coding   GIFtS: 66

GC03P176269
phosphoinositide-3-kinase, catalytic, alpha polypeptide
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
Products    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases & Descriptions
phosphoinositide-3-kinase, catalytic, alpha polypeptide1 2     MGC1421612
PtdIns-3-kinase subunit p110-alpha2 3     phosphatidylinositol 3-kinase, catalytic, alpha polypeptide2
Phosphatidylinositol-4,5-bisphosphate 3-kinase 110 kDa catalytic subunit alpha2 3     PtdIns-3-kinase p1102
PtdIns-3-kinase subunit alpha2 3     p110-alpha2
PI3K-alpha2 3     phosphatidylinositol 3-kinase, catalytic, 110-KD, alpha2
PI3-kinase subunit alpha2 3     phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit, alpha isoform2
MGC1421632     PI3-kinase p110 subunit alpha2
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform2     EC 2.7.1.1533
PI3K2     

External Ids:    HGNC: 89751   Entrez Gene: 52902   Ensembl: ENSG000001218797   UniProtKB: P423363   

Export aliases for PIK3CA gene to outside databases

Previous GC identifers: GC03P175570 GC03P179758 GC03P180318 GC03P180237 GC03P180399 GC03P180349 GC03P178865


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for PIK3CA:
Phosphatidylinositol 3-kinase is composed of an 85 kDa regulatory subunit and a 110 kDa catalytic subunit. The protein
encoded by this gene represents the catalytic subunit, which uses ATP to phosphorylate PtdIns, PtdIns4P and
PtdIns(4,5)P2. This gene has been found to be oncogenic and has been implicated in cervical cancers. (provided by
RefSeq)

UniProtKB/Swiss-Prot: PK3CA_HUMAN, P42336
Function: Phosphorylates PtdIns, PtdIns4P and PtdIns(4,5)P2 with a preference for PtdIns(4,5)P2

summary for PIK3CA:
PI 3-Kinases (phosphoinositide 3-kinases, PI3Ks) are family of lipid kinases capable of phosphorylating the
3'OH of the inositol ring of phosphoinositides. They are responsible for coordinating a diverse range of
cell functions including proliferation, cell survival, degranulation, vesicular trafficking and cell
migration. The PI 3-kinases are grouped into three distinct classes. Class I PI 3-kinases are heteromeric
consisting of a regulatory subunit and a 110 kDA catalytic subunits (3 forms in class 1A : alpha-, beta- and
delta- and one in class 1B : gamma-). PI 3-kinases p110 alpha- and beta- are ubiquitously expressed whilst
p110 delta- expression is associated with leukocytes. Activating mutations in the p110alpha- subunit have
recently been discovered in certain types of cancer cell. Class II PI 3-kinases are large homomeric enzymes
(C2alpha-, beta- and gamma-) that are sensitive to wortmannin (although less sensitive than Class 1 PI
3-kinases) but are resistant to LY 292002. Class III contains just one member, hVps34p, which is thought to
play an important role in both protein sorting and nutrient sensing in concert with the mTOR pathway.


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 60), Regulatory elements and Epigenetics data according to Qiagen and/or SABiosciences)
About This Section

Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the PIK3CA gene promoter:
         CUTL1   FOXO4   FOXO1a   p300   PPAR-gamma2   Egr-1   PPAR-gamma1   p53   FOXC1   IRF-7A   
         Other transcription factors

   Search SABiosciences Chromatin IP Primers for PIK3CA

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays for PIK3CA 


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q26.3   Ensembl cytogenetic band:  3q26.32   HGNC cytogenetic band: 3q26.3

PIK3CA Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
PIK3CA gene location

GeneLoc gene densities for chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03P176269:  view genomic region     (about GC identifiers)

Start:
176,269,843 bp from pter
End:
176,355,772 bp from pter
Size:
85,930 bases
Orientation:
plus strand

1 alternative location:
Chr3+ 178,865,902-178,957,881     
RefSeq DNA sequence:
NC_000003.11  NT_005612.16  

(According to 1UniProtKB, neXtProt, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Millipore, Sigma-Aldrich, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, and/or ProSpec,
Biochemical Assays by Millipore, Sigma-Aldrich, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Dec 2010 and Entrez Gene, Antibodies by Millipore, Sigma-Aldrich, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, and/or Epitomics)
About This Section

UniProtKB/Swiss-Prot: PK3CA_HUMAN, P42336 (See protein sequence)
Recommended Name: Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform  
Size: 1068 amino acids; 124284 Da
Subunit: Heterodimer of a p110 (catalytic) and a p85 (regulatory) subunit. Binds to IRS1 in nuclear extracts. Interacts
with RUFY3 (By similarity). Interacts with RASD2 (By similarity)
PDB structures from and Proteopedia :
2ENQ (3D)    2RD0 (3D)    3HHM (3D)    3HIZ (3D)    
Secondary accessions: Q14CW1 Q99762

Explore the universe of human proteins at neXtProt for PIK3CA: NX_P42336 

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins: NP_006209.2  

    ENSEMBL proteins: 
    ENSP00000418145 ENSP00000263967 ENSP00000417479 


    Human Recombinant Proteins 
    Millipore Purified and/or Recombinant PIK3CA Protein
    Sigma-Aldrich Proteins for PIK3CA
    Browse R&D Systems for human recombinant proteins
    Enzo Life Sciences proteins for PIK3CA
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    OriGene Protein Over-expression Lysate: PIK3CA
    GenScript Custom Purified and Recombinant Proteins Services for PIK3CA 
    Novus Biologicals Protein for PIK3CA
    Novus Biologicals Lysate for PIK3CA
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins

    3 Gene Ontology (GO) cellular component terms (GO ID links to tree view):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005829 cytosol TAS--
    GO:0005942 phosphoinositide 3-kinase complex IEA--
    GO:0030027 lamellipodium IEA--
    About this table

    PIK3CA for ontologies           About GeneDecksing



    Antibodies for PIK3CA: 
    Millipore Mono- and Polyclonal Antibodies for the study of PIK3CA
    Sigma-Aldrich Antibodies for PIK3CA
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for PIK3CA  (PI3K p110 alpha)
    OriGene Antibodies (see all 3): PIK3CA
    GenScript Custom Superior Antibodies Services for PIK3CA 
    Novus Biologicals Antibodies for PIK3CA
    Epitomics antibodies for PIK3CA

    Assays for PIK3CA: 
    Millipore Kits and Assays for the Analysis of PIK3CA
    Browse ELISAs at Sigma-Aldrich
    OriGene Custom Immunoassay Development 
    Browse OriGene Fluorogenic Cell Assay Kits 
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for PIK3CA 
    Browse Enzo Life Sciences for kits & assays
    Browse ELISAs and CLIAs at Uscn 


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    PIK3CA for domains           About GeneDecksing

    5/11 InterPro domains/families (see all 11):
     IPR001263 PInositide-3_kin_accessory_dom
     IPR003113 PI3K_p85-bd
     IPR002420 PI3K_C2
     IPR011009 Kinase-like_dom
     IPR000403 PI3/4_kinase_cat

    Graphical View of Domain Structure for InterPro Entry P42336

    ProtoNet protein and cluster: P42336

    4 Blocks protein families:
    IPB000008 C2 domain
    IPB000341 Phosphoinositide 3-kinase
    IPB000403 Phosphatidylinositol 3- and 4-kinase
    IPB003113 Phosphatidylinositol 3-kinase


    UniProtKB/Swiss-Prot: PK3CA_HUMAN, P42336
    Similarity: Belongs to the PI3/PI4-kinase family
    Similarity: Contains 1 C2 domain
    Similarity: Contains 1 PI3K/PI4K domain


    (According to UniProtKB, IUBMB,and/or Genatlas, Animal models from MGI Dec 24 2010,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Millipore, siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich, microRNA from Sigma-Aldrich, Qiagen, SABiosciences, Clones from Millipore, Sigma-Aldrich, OriGene, GenScript, Sino Biological, Cell Lines from GenScript, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene.)
    About This Section

    UniProtKB/Swiss-Prot: PK3CA_HUMAN, P42336
    Function: Phosphorylates PtdIns, PtdIns4P and PtdIns(4,5)P2 with a preference for PtdIns(4,5)P2
    Catalytic activity: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol
    3,4,5-trisphosphate
    Enzyme Number (IUBMB): EC 2.7.1.153 

    Inhib.
    RNA:
        
    Browse for Gene Knock-down Tools from Millipore
    Sigma-Aldrich Nano Scale siRNA for PIK3CA
    Sigma-Aldrich siRNA Panels and esiRNA and siRNA for PIK3CA
    Sigma-Aldrich shRNA Panels and shRNA for PIK3CA
    OriGene 29mer shRNA kits in GFP-retroviral vector: PIK3CA
    OriGene shRNA RFP: PIK3CA
    OriGene basic RS shRNA: PIK3CA
    OriGene siRNA: PIK3CA
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of PIK3CA 
    miRNA:Sigma-Aldrich microRNA Mimics for PIK3CA
    Browse microRNA target validation systems at Sigma-Aldrich 
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of PIK3CA 
    6 SABiosciences Assays for microRNAs that regulate PIK3CA:
    hsa-miR-203 hsa-miR-124 hsa-miR-10b hsa-miR-506 hsa-miR-1274b hsa-miR-10a

    Gene
    Editing:
    Sigma-Aldrich CompoZr Knockout ZFN for PIK3CA 

    Clones:Browse Clones for the Expression of Recombinant Proteins Available from Millipore
    Browse iPSC Reprogramming Factors at Sigma-Aldrich
    OriGene GFP tagged cDNA clones in CMV expression vector: PIK3CA
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector: PIK3CA
    OriGene untagged cDNA clones in CMV expression vector: PIK3CA
    OriGene 3'-UTR clone: PIK3CA 
    Browse MicroRNA Expression Plasmids 
    GenScript cDNA clone with any tag delivered in your preferred vector: PIK3CA 
    Browse Sino Biological Human cDNA Clones

    Cell
    Lines:
      
    GenScript Custom overexpressing Cell Line Services for PIK3CA 

    Genatlas biochemistry entry for PIK3CA:
    phosphatidylinositol-3-kinase,catalytic,class 1,alpha subunit,widely expressed, activated by growth factors,through
    binding p785 adaptor proteins (PIK3R1,PIK3R2,PIK3R3),activating Akts in the antiapoptotic PIK3 pathway,antagonized by
    PTEN,mediating angiogenes is and expression of VEGF in endothelial cells,involved in the regulation of cellular
    processes,potentially oncogenic in ovarian cancer

    5/9 Gene Ontology (GO) molecular function terms (GO ID links to tree view) (see all 9):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000166 nucleotide binding IEA--
    GO:0004428 inositol or phosphatidylinositol kinase activity IEA--
    GO:0005515 protein binding IPI10490823
    GO:0005524 ATP binding IEA--
    GO:0016303 1-phosphatidylinositol-3-kinase activity IDA2174051
    About this table

    PIK3CA for ontologies           About GeneDecksing

    Animal Models: 15/16 MGI mutant phenotypes (inferred from 8 alleles(MGI details for Pik3ca) (see all 16):

    adipose tissuebehavior/neurologicalcardiovascular systemcellularembryogenesis
    endocrine/exocrine glandgrowth/sizehomeostasis/metabolismimmune systemlethality-postnatal
    lethality-prenatal/perinatalmusclenervous systemno phenotypic analysistumorigenesis

    PIK3CA for phenotypes           About GeneDecksing


    (Pathways according to Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB, Sets of similar genes according to GeneDecks, PCR Arrays from SABiosciences, Proteins Network according to SABiosciences, Sigma-Aldrich, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Dec 2010 via Entrez Gene).
    About This Section


    PIK3CA for pathways           About GeneDecksing

    5/68 Millipore Pathways for PIK3CA (see all 68)
        Immune response CD16 signaling in NK cells
    Cytoskeleton remodeling FAK signaling
    Cytoskeleton remodeling Role of PDGFs in cell migration
    Development PDGF signaling via MAPK cascades
    Development A2A receptor signaling

    5/130 Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Pathways for  PIK3CA (see all 130)
        Relaxin Signaling
    Dendritic Cell Maturation
    G-Protein Coupled Receptor Signaling
    Renal Cell Carcinoma Signaling
    LPS-stimulated MAPK Signaling

    2 Cell Signaling Technology (CST) Pathways for PIK3CA
        Insulin Receptor Signaling
    B Cell Receptor Signaling

    5/40 Kegg Pathways  (Kegg details for PIK3CA) (see all 40):
        hsa00562 Inositol phosphate metabolism
    hsa04012 ErbB signaling pathway
    hsa04062 Chemokine signaling pathway
    hsa04070 Phosphatidylinositol signaling system
    hsa04150 mTOR signaling pathway

        SABiosciences Pathway-Focused PCR Arrays including PIK3CA (see all 8): PAHS-030A PAHS-040A  

        Sigma-Aldrich "Your Favorite Gene" (powered by Ingenuity) Molecular Interaction Network for PIK3CA
        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for PIK3CA

    5/280 Interacting proteins for PIK3CA (P423361, 2 ENSP000002639673) via UniProtKB, MINT, and/or STRING (see all 280)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    PIK3R1P279862, ENSP000002743353MINT-6170530 MINT-7383676 MINT-7298487 STRING: ENSP00000274335
    IRS1P355682, ENSP000003048953MINT-68707 STRING: ENSP00000304895
    ERBB3P218601EBI-2116585,EBI-720706
    HRASENSP000003733823STRING: ENSP00000373382
    LCKENSP000003282133STRING: ENSP00000328213
    About this table

    5/19 Gene Ontology (GO) biological process terms (GO ID links to tree view) (see all 19):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006006 glucose metabolic process IEA--
    GO:0006468 protein phosphorylation IEA--
    GO:0006916 anti-apoptosis IEA--
    GO:0007165 signal transduction IEA--
    GO:0007173 epidermal growth factor receptor signaling pathway TAS--
    About this table

    PIK3CA for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    PIK3CA for compounds           About GeneDecksing

    Browse Small Molecules at Sigma-Aldrich
    Enzo Life Sciences drugs & compounds for PIK3CA

    Compounds for PIK3CA available from Tocris Bioscience
    CompoundAction CAS number
    LY 294002 hydrochlorideSelective PI 3-kinase inhibitor[154447-36-6]
    QuercetinNon-selective PI 3-kinase inhibitor[117-39-5]
    PI 103 hydrochloride Inhibitor of PI 3-kinase, mTOR and DNA-PK [371935-74-9]
    BAG 956Dual PI 3-kinase and PDK1 inhibitor[853910-02-8]
    PI 828 PI 3-kinase inhibitor, more potent than LY 294002 (Cat.No. 1130) [942289-87-4]
    About this table


    10/86 Novoseek chemical compound relationships for PIK3CA gene (see all 86)
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    phosphatidylinositol 93.1 425 8663584 (4), 12897244 (3), 7713498 (2), 17377809 (2) (see all 99)
    phosphoinositide 89 184 11882383 (2), 10926936 (2), 19679877 (2), 12545728 (2) (see all 99)
    wortmannin 87.1 162 10794659 (3), 11559593 (3), 8657148 (2), 10671571 (2) (see all 99)
    rapamycin 81.3 71 20115955 (2), 18676851 (2), 12433206 (1), 19061482 (1) (see all 55)
    phosphatidylinositol-3,4,5-trisphosphate 74.2 14 12897244 (2), 20054340 (1), 9593670 (1), 19509113 (1) (see all 10)
    naphtho(1,2-b)furan-4,5-dione 71.6 1 20371243 (1), 20036260 (1)
    ly294002 70.2 50 19383818 (3), 18262558 (2), 15277479 (2), 12621049 (2) (see all 28)
    ctmp 64.1 1 16150119 (1)
    tyrosine 60.1 62 10763917 (2), 16311104 (2), 18449193 (2), 10963852 (1) (see all 47)
    glycogen 60.1 22 17055733 (1), 18782353 (1), 20471052 (1), 16170333 (1) (see all 22)
    About this table



    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 228 Homo sapiens; Dec 8 2010) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Millipore,
    siRNAs from Sigma-Aldrich, OriGene, Qiagen, Super-pooled esiRNAs from Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene, microRNA from Sigma-Aldrich, Qiagen, SABiosciences,
    Tagged/untagged cDNA clones from OriGene, Sigma-Aldrich, GenScript, Primers from OriGene and/or SABiosciences)
    About This Section

    Inhib.
    RNA:
         
    Browse for Gene Knock-down Tools from Millipore
    Sigma-Aldrich Nano Scale siRNA for PIK3CA
    Sigma-Aldrich siRNA Panels and esiRNA and siRNA for PIK3CA
    Sigma-Aldrich shRNA Panels and shRNA for PIK3CA
    OriGene 29mer shRNA kits in GFP-retroviral vector: PIK3CA
    OriGene shRNA RFP: PIK3CA
    OriGene basic RS shRNA: PIK3CA
    OriGene siRNA: PIK3CA
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing of PIK3CA 
    miRNA: Sigma-Aldrich microRNA Mimics for PIK3CA
    Browse microRNA target validation systems at Sigma-Aldrich 
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of PIK3CA 
    6 SABiosciences Assays for microRNAs that regulate PIK3CA:
    hsa-miR-203 hsa-miR-124 hsa-miR-10b hsa-miR-506 hsa-miR-1274b hsa-miR-10a
    Clones: Browse FLAG tag genes at Sigma-Aldrich
    OriGene GFP tagged cDNA clones in CMV expression vector: PIK3CA
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector: PIK3CA
    OriGene untagged cDNA clones in CMV expression vector: PIK3CA
    OriGene 3'-UTR Clone: PIK3CA 
    Browse OriGene MicroRNA Expression Plasmids 
    GenScript cDNA clone with any tag delivered in your preferred vector: PIK3CA 
    Primers: OriGene genome-wide validated SYBR primer pairs: PIK3CA
    Browse OriGene validated miRNA SYBR primer pairs 
    SABiosciences RT2 qPCR Primer Assay for PIK3CA: PPH01355A

    REFSEQ mRNAs for PIK3CA gene: 

    NM_006218.2  

    Additional cDNA sequence: 

    AK021510.1 CR601404.1 DQ787424.1 DQ910907.1 

    5 DOTS entries:

    DT.313816  DT.99950166  DT.100741537  DT.99939096  DT.100737416 

    24/74 AceView cDNA sequences (see all 74):

    AL706270 AI679006 BG497751 N33289 BP337031 AA331546 BX108528 AA905413 
    BX437220 AA732379 BM470620 AI245465 BQ228953 AI632172 BU167122 BX473473 
    BE246374 AA298585 BX482711 AU280420 CA310666 BX503208 AA661803 BP336348 

    highest scoring ESTs for PIK3CA:

    AA190799 AA298585 AA661803 AA837525 AA847833 AI632172 AI679006 AU151957 AV651586 AW068262 

    Unigene Clusters for PIK3CA:

    Phosphoinositide-3-kinase, catalytic, alpha polypeptide
    Hs.85701  [show with all ESTs], Hs.553498  [show with all ESTs]
    Unigene Representative Sequences: NM_006218, AK021510


    GeneLoc Exon Structure

    4 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000477735 ENST00000263967(uc003fjk.2) ENST00000468036 ENST00000462255


    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 228 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Primers from OriGene and/or SABiosciences )
    About This Section

    PIK3CA expression in normal and diseased human tissues

    1  / 2  / 3

    10 probe-sets matching PIK3CA gene

    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank
    83177_at2 U95-E 1 0.44 1.00 0.88 1.37 -- -- -- -- --
    81516_at2, 3 U95-E 2 0.44 0.58 0.87 1.23 R22204 0.20 1.00 0.72 1
    41969_at2, 3 U95-B 1 0.38 1.00 0.90 0.73 AA088326 0.20 1.00 0.72 1
    40704_at2, 3 U95-A 1 0.31 1.00 0.28 0.70 Z29090 0.80 1.00 0.91 1
    204369_at2, 3 U133-A 1 0.91 1.00 -- -- NM_006218 0.60 1.00 0.82 1
    235980_at2, 3 U133-B 1 0.36 1.00 -- -- AA767763 0.20 1.00 0.72 1
    231854_at2 U133-B 1 0.27 1.00 -- -- -- -- -- -- --
    204369_at2 U133Plus2 1 0.91 1.00 -- -- -- -- -- -- --
    235980_at2 U133Plus2 1 0.36 1.00 -- -- -- -- -- -- --
    231854_at2 U133Plus2 1 0.27 1.00 -- -- -- -- -- -- --
    About this table

    PIK3CA for expression           About GeneDecksing

    Data from Genenote  (Publications) and GNF BioGPS
        About these images
    PIK3CA gene expression
    PIK3CA gene electronic northern expression
    PIK3CA gene sage expression
    About these images

    CGAP SAGE TAG: GCCGATTTCA TTATGCCTTA

    SOURCE GeneReport for Unigene clusters: Hs.85701 Hs.553498

    Expression variation in blood from EXPOLDB for PIK3CA

    Primers: OriGene genome-wide validated SYBR primer pairs: PIK3CA
    Browse OriGene validated miRNA SYBR primer pairs 
    SABiosciences RT2 qPCR Primer Assay for PIK3CA: PPH01355A
        SABiosciences Expression via Pathway-Focused PCR Arrays including PIK3CA (see all 8): PAHS-030A PAHS-040A  


    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Dec 24 2010, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section

    Orthologs for PIK3CA gene from 5/9 species (see all 9)
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    PIK3CA1   -- phosphoinositide-3-kinase, catalytic, alpha polypeptide 96.13(n)
    99.81(a)
    488084  XM_545208.2  XP_545208.2 
    chimpanzee
    (Pan troglodytes)
    PIK3CA1   -- phosphoinositide-3-kinase, catalytic, alpha polypeptide 99.94(n)
    100(a)
    460858  XM_001167506.1  XP_001167506.1 
    cow
    (Bos taurus)
    PIK3CA1   -- phosphoinositide-3-kinase, catalytic, alpha polypeptide 96.35(n)
    99.81(a)
    282306  NM_174574.1  NP_776999.1 
    mouse
    (Mus musculus)
    Pik3ca1 , 5 3 (15.70 cM)5
    phosphatidylinositol 3-kinase, catalytic, alpha polypeptide1, 5 89.54(n)1
    98.6(a)1
    187061  NM_008839.11  NP_032865.11 
     AI4631075  AI5285675  (see all 22)
    chicken
    (Gallus gallus)
    PIK3CA1   -- phosphoinositide-3-kinase, catalytic, alpha polypeptide 85.3(n)
    96.25(a)
    424971  NM_001004410.1  NP_001004410.1 
    About this table        Species with no ortholog for PIK3CA

    ENSEMBL Gene Tree for PIK3CA (if available)

    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section
    Paralogs for PIK3CA gene
    PIK3C2B2  PIK3CD2  PIK3C2G2  PIK3C32  PIK3CB2  PIK3CG2  PIK3C2A2  

    PIK3CA for paralogs           About GeneDecksing



    (SNPs according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Resequencing Primers from Qiagen)
    About This Section

    10/755 NCBI SNPs in PIK3CA are shown (see all 755)
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidChr 3 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ----------
    rs8709951,2
    C,A,178913006(+) GAAATA/CTAACT 1 -- int112Minor allele frequency- C:0.49MN NA EA WA 764
    rs9504861,2
    C,F,A178936484(+) CTTACG/ATTTCT 1 -- int13Minor allele frequency- A:0.06MN NA WA 188
    rs10513971,2
    --178916623(+) CTCCAA/CGACCA 2 R syn1 ref10--------
    rs10513981,2
    --178916679(+) CTAGTA/GGAATG 2 V ref1 syn1 ese30--------
    rs10513991,2
    H178916740(+) CATTAA/GTAACC 2 I V ref1 mis14Minor allele frequency- G:0.00NS EA 406
    rs10514001,2
    --178916904(+) CAACCA/CTTTTT 2 P syn1 ref10--------
    rs10514011,2
    --178917503(+) GTGTGC/TGAATT 2 C syn1 ref10--------
    rs10514021,2
    --178917527(+) GATCCA/TGAAGT 2 P ref1 syn1 ese30--------
    rs10514031,2
    --178917557(+) ATTCTG/TAACGT 2 L ref1 syn10--------
    rs10514041,2
    --178917560(+) CTGAAC/TGTTTG 2 N ref1 syn10--------
    About this table

    HapMap Linkage Disequilibrium images for PIK3CA (up to first 250kb)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for PIK3CA
         1 CNV: 91720
         1 Indel: 59111

    QIAGEN SeqTarget long-range PCR primers for resequencing PIK3CA 

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, LSDB, HGMD, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    PIK3CA for disorders           About GeneDecksing

    OMIM: 171834   disorders: 604370  114480  114500  137215  114550  211980  182000  162900  

    UniProtKB/Swiss-Prot: PK3CA_HUMAN, P42336

  • Defects in PIK3CA are associated with colorectal cancer (CRC) [MIM:114500]
  • Defects in PIK3CA are a cause of susceptibility to breast cancer (BC) [MIM:114480]. A common malignancy
  • originating from breast epithelial tissue. Breast neoplasms can be distinguished by their histologic pattern. Invasive
    ductal carcinoma is by far the most common type. Breast cancer is etiologically and genetically heterogeneous.
    Important genetic factors have been indicated by familial occurrence and bilateral involvement. Mutations at more than
    one locus can be involved in different families or even in the same case
  • Defects in PIK3CA are a cause of susceptibility to ovarian cancer (OC) [MIM:167000]. Ovarian cancer common
  • malignancy originating from ovarian tissue. Although many histologic types of ovarian neoplasms have been described,
    epithelial ovarian carcinoma is the most common form. Ovarian cancers are often asymptomatic and the recognized signs
    and symptoms, even of late-stage disease, are vague. Consequently, most patients are diagnosed with advanced disease
  • Defects in PIK3CA may underlie hepatocellular carcinoma (HCC) [MIM:114550]
  • Defects in PIK3CA are a cause of keratosis seborrheic (KERSEB) [MIM:182000]. A common benign skin tumor.
  • Seborrheic keratoses usually begin with the appearance of one or more sharply defined, light brown, flat macules. The
    lesions may be sparse or numerous. As they initially grow, they develop a velvety to finely verrucous surface,
    followed by an uneven warty surface with multiple plugged follicles and a dull or lackluster appearance

    10/80 Novoseek disease relationships for PIK3CA gene (see all 80)

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    cancer 68.6 291 19573809 (6), 19384426 (5), 18059185 (4), 17575152 (4) (see all 99)
    somatic mutations 68.1 59 16168105 (4), 17052259 (3), 16533766 (2), 18951408 (2) (see all 33)
    tumors 65.5 343 17714348 (7), 15928251 (6), 19237633 (5), 16322209 (4) (see all 99)
    glioblastoma 65.2 58 17235514 (5), 18676851 (5), 17050665 (4), 12782577 (4) (see all 22)
    follicular thyroid cancer 61.6 4 15928251 (2), 17426084 (1)
    thyroid carcinoma anaplastic 60.9 5 16288007 (2), 15928251 (1), 18000091 (1), 18502332 (1)
    breast cancer 56.5 135 16168105 (7), 19685490 (5), 17202311 (5), 18676830 (4) (see all 57)
    cowden disease 55.9 1 19897009 (1)
    glioblastoma multiforme 51.8 4 17050665 (1), 15924253 (1), 15143086 (1)
    ovarian cancer 51.7 46 12874030 (4), 16839745 (3), 15028555 (3), 18270270 (3) (see all 23)
    About this table

    Genetic Association Database (GAD): PIK3CA
    Human Genome Epidemiology (HuGE) Navigator: PIK3CA (106 documents)

    Export disorders and mutations for PIK3CA gene to outside databases

    (Possibly Related Articles in Doctor's Guide)
    About This Section

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6UniProtKB/TrEMBL, and/or 7Novoseek)
    About This Section

    10/1165 PubMed articles for PIK3CA gene, integrated from 7 sources (see all 1165):
    (articles sorted by number of sources associating them with PIK3CA)
    1. PIK3CA mutation and histological type in breast carcinoma: high frequency of mutations in lobular carcinoma. (PubMed id 16353168)1, 2, 4 Buttitta F....Marchetti A. (2006)
    2. The prevalence of PIK3CA mutations in gastric and colon cancer. (PubMed id 15994075)1, 2, 4 Velho S....Seruca R. (2005)
    3. Mutations of PIK3CA in gastric adenocarcinoma. (PubMed id 15784156)1, 2, 7 Li V.S.W.... Leung S.Y. (2005)
    4. Somatic mutation and gain of copy number of PIK3CA in human breast cancer. (PubMed id 16168105)1, 4, 7 Wu G....Sidransky D. (2005)
    5. High frequency of coexistent mutations of PIK3CA and PTEN genes in endometrial carcinoma. (PubMed id 16322209)1, 2, 7 Oda K.... McCormick F. (2005)
    6. PIK3CA mutations in head and neck squamous cell carcinoma. (PubMed id 16533766)1, 2, 7 Qiu W.... Su G.H. (2006)
    7. Uncommon mutation, but common amplifications, of the PIK3CA gene in thyroid tumors. (PubMed id 15928251)1, 4, 7 Wu G....Xing M. (2005)
    8. Mutation of the PIK3CA gene in ovarian and breast cancer. (PubMed id 15520168)1, 2, 7 Campbell I.G....Phillips W.A. (2004)
    9. Oncogenic PIK3CA mutations occur in epidermal nevi and seborrheic keratoses with a characteristic mutation pattern. (PubMed id 17673550)1, 2, 7 Hafner C....Real F.X. (2007)
    10. PIK3CA mutations in breast cancer are associated with poor outcome. (PubMed id 16317585)1, 4, 7 Li S.Y....Iacopetta B. (2006)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
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    Aliases
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      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 5290 HGNC: 8975 AceView: PIK3CA Ensembl:ENSG00000121879 euGenes: HUgn5290
    ECgene: PIK3CA Kegg: 5290 H-InvDB: PIK3CA

    (According to HUGE)
    About This Section
      --

    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    ATLAS Chromosomes in Cancer entry for PIK3CA Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from XenneX, Inc.)
    About This Section
    Patent Information for PIK3CA gene:
    Search GeneIP for patents involving PIK3CA

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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