rppaTumorData {SuperCurve}R Documentation

ERK2, GSK3, and JNK expression in tumor samples

Description

This data set contains the expression levels of three proteins: ERK2, GSK3, and JNK in 96 breast tumor samples and controls, measured in dilution series using reverse-phase protein arrays.

This data set also contains a description of the design of the reverse-phase protein array used in a set of experiments to measure protein levels in 101 different tumors. Cell lysates were spotted on the array in six-step dilution series. The layout of the array consisted of a grid of 4x6 subgrids. Each row of a subgrid contained the dilution series for a single sample, in decreasing concentration from left to right.

Usage

data(rppaTumorData)

Format

The objects erk2, gsk3, and jnk are objects of the RPPA class. The object tDesign is an object of the RPPADesign class.

Source

Bryan Hennessey and Gordon Mills

References

KRC


[Package SuperCurve version 0.931 Index]