Classes and methods for "class comparison" problems on microarrays

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Documentation for package `ClassComparison' version 2.5.0

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anova,MultiLinearModel-method The MultiLinearModel Class
as.data.frame,SingleGroup-method The SingleGroup Class
as.data.frame,SmoothTtest-method The SmoothTtest Class
as.data.frame,TwoGroupStats-method The TwoGroupStats Class
Bum The Bum Class
Bum-class The Bum Class
BumSummary The BumSummary class
BumSummary-class The BumSummary class
countSignificant Generic Functions for Significance
countSignificant,Bum-method The Bum Class
countSignificant,Dudoit-method The Dudoit Class
countSignificant,MultiWilcoxonTest-method The MultiWilcoxonTest Class
countSignificant,Sam-method The Sam Class
countSignificant,TNoM-method The TNoM and fullTNoM Classes
cutoffSignificant Generic Functions for Significance
cutoffSignificant,Bum-method The Bum Class
cutoffSignificant,Dudoit-method The Dudoit Class
cutoffSignificant,MultiWilcoxonTest-method The MultiWilcoxonTest Class
Dudoit The Dudoit Class
Dudoit-class The Dudoit Class
dwil Wilcoxon Density Function
fullTNoM-class The TNoM and fullTNoM Classes
hist,Bum-method The Bum Class
hist,fullTNoM-method The TNoM and fullTNoM Classes
hist,MultiLinearModel-method The MultiLinearModel Class
hist,MultiTtest-method The MultiTtest Class
hist,MultiWilcoxonTest-method The MultiWilcoxonTest Class
image,Bum-method The Bum Class
likelihoodBum The Bum Class
matrixMean Multiple T Tests by Matrix Multiplication
matrixT Multiple T Tests by Matrix Multiplication
matrixVar Multiple T Tests by Matrix Multiplication
MultiLinearModel The MultiLinearModel Class
MultiLinearModel-class The MultiLinearModel Class
MultiTtest The MultiTtest Class
MultiTtest-class The MultiTtest Class
multiTukey The MultiLinearModel Class
MultiWilcoxonTest The MultiWilcoxonTest Class
MultiWilcoxonTest-class The MultiWilcoxonTest Class
plot,Dudoit,missing-method The Dudoit Class
plot,fullTNoM,missing-method The TNoM and fullTNoM Classes
plot,MultiLinearModel,ANY-method The MultiLinearModel Class
plot,MultiLinearModel,missing-method The MultiLinearModel Class
plot,MultiTtest,ANY-method The MultiTtest Class
plot,MultiTtest,missing-method The MultiTtest Class
plot,MultiWilcoxonTest,missing-method The MultiWilcoxonTest Class
plot,Sam,missing-method The Sam Class
plot,SingleGroup,missing-method The SingleGroup Class
plot,SmoothTtest,missing-method The SmoothTtest Class
plot,TwoGroupStats,missing-method The TwoGroupStats Class
print,SingleGroup-method The SingleGroup Class
print,TwoGroupStats-method The TwoGroupStats Class
rankSum Wilcoxon Rank-Sum Statistic
Sam The Sam Class
Sam-class The Sam Class
SamSummary The SamSummary Class
SamSummary-class The SamSummary Class
selectSignificant Generic Functions for Significance
selectSignificant,Bum-method The Bum Class
selectSignificant,Dudoit-method The Dudoit Class
selectSignificant,MultiWilcoxonTest-method The MultiWilcoxonTest Class
selectSignificant,Sam-method The Sam Class
selectSignificant,TNoM-method The TNoM and fullTNoM Classes
show,BumSummary-method The BumSummary class
show,SamSummary-method The SamSummary Class
show,TNoMSummary-method The TNoMSummary Class
SingleGroup The SingleGroup Class
SingleGroup-class The SingleGroup Class
SmoothTtest The SmoothTtest Class
SmoothTtest-class The SmoothTtest Class
summary,Bum-method The Bum Class
summary,MultiLinearModel-method The MultiLinearModel Class
summary,MultiTtest-method The MultiTtest Class
summary,MultiWilcoxonTest-method The MultiWilcoxonTest Class
summary,Sam-method The Sam Class
summary,SingleGroup-method The SingleGroup Class
summary,SmoothTtest-method The SmoothTtest Class
summary,TNoM-method The TNoM and fullTNoM Classes
summary,TwoGroupStats-method The TwoGroupStats Class
TNoM The TNoM and fullTNoM Classes
TNoM-class The TNoM and fullTNoM Classes
TNoMSummary The TNoMSummary Class
TNoMSummary-class The TNoMSummary Class
TwoGroupStats The TwoGroupStats Class
TwoGroupStats-class The TwoGroupStats Class
update,TNoM-method The TNoM and fullTNoM Classes