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| aspectHeatmap | Heatmap with control over the aspect ratio |
| bluescale | Color Schemes for Images and Heat Maps |
| blueyellow | Color Schemes for Images and Heat Maps |
| BootstrapClusterTest | The BootstrapClusterTest Class |
| BootstrapClusterTest-class | The BootstrapClusterTest Class |
| cluster3 | Cluster a Dataset Three Ways |
| ClusterTest | The ClusterTest Class |
| ClusterTest-class | The ClusterTest Class |
| cutHclust | Get the List of Classes From A Clustering Algorithm |
| cutKmeans | Get the List of Classes From A Clustering Algorithm |
| cutPam | Get the List of Classes From A Clustering Algorithm |
| cutRepeatedKmeans | Get the List of Classes From A Clustering Algorithm |
| distanceMatrix | Distance Matrix Computation |
| GenePCA | The GenePCA Class |
| GenePCA-class | The GenePCA Class |
| greenscale | Color Schemes for Images and Heat Maps |
| hclust-class | An S4 hclust class |
| hist,ClusterTest-method | The ClusterTest Class |
| image,ClusterTest-method | The ClusterTest Class |
| jetColors | Color Schemes for Images and Heat Maps |
| Mosaic | The Mosaic Class |
| Mosaic-class | The Mosaic Class |
| PCanova | The PCanova Class |
| PCanova-class | The PCanova Class |
| PerturbationClusterTest | The PerturbationClusterTest Class |
| PerturbationClusterTest-class | The PerturbationClusterTest Class |
| plot,GenePCA,missing-method | The GenePCA Class |
| plot,Mosaic,missing-method | The Mosaic Class |
| plot,PCanova,missing-method | The PCanova Class |
| plot,SamplePCA,missing-method | The SamplePCA Class |
| plotColoredClusters | Plot Dendrograms with Color-Coded Labels |
| pltree,Mosaic-method | The Mosaic Class |
| pltree,PCanova-method | The PCanova Class |
| predict,SamplePCA-method | The SamplePCA Class |
| redgreen | Color Schemes for Images and Heat Maps |
| redscale | Color Schemes for Images and Heat Maps |
| repeatedKmeans | Get the List of Classes From A Clustering Algorithm |
| SamplePCA | The SamplePCA Class |
| SamplePCA-class | The SamplePCA Class |
| screeplot,SamplePCA-method | The SamplePCA Class |
| summary,BootstrapClusterTest-method | The BootstrapClusterTest Class |
| summary,ClusterTest-method | The ClusterTest Class |
| summary,Mosaic-method | The Mosaic Class |
| summary,PCanova-method | The PCanova Class |
| summary,PerturbationClusterTest-method | The PerturbationClusterTest Class |
| summary,SamplePCA-method | The SamplePCA Class |