Example Software Project
| Overview | |
| Description | To change information in this box, edit the ‘front matter’ in the software’s markdown page. |
| Development Information | |
| GitHub | MD-Anderson-Bioinformatics/MBatch |
| Language | R |
| Current version | 1.4.17 |
| Platforms | All platforms |
| Status | Active |
| Last updated | 11/06/2018 |
| References | |
| Citation |
Submitted to Nature Methods
Rohrdanz, M. A., Zheng, W., Hoff, W., Lambeth, B., Vreede, J., and Clementi, C., “Multiscale Approach to the Determination of Photoactive Yellow Protein Signalling State Ensemble”, PLOS Computational Biology, (2014) https://doi.org/10.1371/journal.pcbi.1003797 Rohrdanz, M. A., Herbert, J. H., “Simultaneous benchmarking of ground- and excited-state properties with long-range-corrected density functional theory”, J. Chem. Phys. 129, 034107 (2008) |
| Help and Support | |
| Contact |
Tod Casasent
Chris Wakefield |
Example Software Project
This is an example software project to show how to use the theme. This page was generated from the file: content/public-software/example.md, and will
NOT be part of the actual web site.
The information in the box to the right comes from the 'front matter' in this file. This is were information like the GitHub URL, language, citation, and contact information can be placed. For reference, the front matter for this page is shown below. This front matter is in YAML format, starting and ending with three hyphens ‘—’. Entries may be left blank (e.g. ‘url’, ‘license’, and ‘news’ below).
For all but two of the keys, the value is simple text. The two keys that different are citation and contact:
- For the citation entry, the value can be either a list or a string.
- If a list: first entry is the text to display (say, the paper’s title), and the second entry is a URL. (As demonstrated on the current page).
- If text: that text will be displayed with no link (As demonstrated on the DyCE page).
- For the contact entry, the value must be a list. The first entry is the contact person’s name; the second entry is their email address.
Here is a shortcode for a button. You can change the colors via parameters within the shortcode.
LAUNCH TCGA BATCH EFFECTS WEBSITE
Front Matter for Example Software Project
—
title: "Example Software Project"
date: 2018-11-11
draft: false
bread: "Example Software" #<– text used in breadcrumb navigation link
description: "To change information in this box, edit the 'front matter' in the software's markdown page."
href:
language: R
current-version: 1.4.17
platforms: All platforms
license:
status: Active
last-updated: 11/06/2018
citation: ["A pan-cancer proteomic perspective on The Cancer Genome Atlas", "https://www.nature.com/articles/ncomms4887"]
news:
contact: ["Tod Casasent", "TDCasasent@mdanderson.org"]
github: "MD-Anderson-Bioinformatics/MBatch"
image: "/public-software/img/dyce.png"
—