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Next-Generation Clustered Heat Map (NG-CHM) R Package

This page is about the NGCHM R package , which can be used to construct Next-Generation Clustered Heat Maps, and contains the following sections:

Package Installation in R

System Requirements

Installation

The above-mentioned R packages can be installed from GitHub with remotes :

remotes::install_github('bmbroom/tsvio')
remotes::install_github('MD-Anderson-Bioinformatics/NGCHMSupportFiles', ref='main')
remotes::install_github('MD-Anderson-Bioinformatics/NGCHM-R')

Using the Docker Image

There is also a Docker image containing RStudio, the NGCHM-R package, and all needed dependencies available on Docker Hub .

The YouTube Video, How to Create Next-Generation Clustered Heat Map in R Studio , details usage of the Docker image. Further installation and usage information is available in ths the RStudio NGCHM project on GitHub.

Vignettes

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