This page is an overview of serchable data in the tcga_rppa_blca_v2.0_protein_protein next-generation clustered heat map. The interactive heat map this page describes can be reached at this link tcga_rppa_blca_v2.0_protein_protein or on one of the links below such as the Heat Map Name, Map Id, or the thumbnail graphic image or through the The Cancer Genome Atlas (TCGA) Next-Generation Clustered Heat Map (NG-CHM) Compendium viewer.

Heat Map Description

Protein-protein comparison of RPPA for 196 proteins in 344 tcga BLCA samples, using the 2017 TCGA Pan-Cancer RPPA data.

General Information

Heat Map Name: tcga_rppa_blca_v2.0_protein_protein
Map Id: a5b2a924b1f509f6a0277dfa888e59b9ac7a1e64

Tumor Type: Bladder Urothelial Carcinoma (BLCA)

cBioPortal Study Id: blca_tcga

Build Date:2017-10-15 16:32:56
Map Version Id:1.1.0

Top Layer Summary View

Next-Generation Clustered Heat Map thumbnail image. Click to go to full-sized next-generation heat map tcga_rppa_blca_v2.0_protein_protein.

Data Layers

Row Information

Number of Rows:196
Row Type:bio.rppa.antibody.name, bio.gene.hugo:list.space, bio.gene.entrezid:list.space

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

Column Information

Number of Columns:196
Column Type:bio.rppa.antibody.name, bio.gene.hugo:list.space, bio.gene.entrezid:list.space

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

Matrix Data Items

Row Labels:

Column Labels:

Related Pages

TCGA Heat Map Compendium Description Index Page
TCGA Heat Map Compendium
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NG-CHM Web Builder
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