This page is an overview of serchable data in the tcga_rppa_brca_v2.0_protein_protein next-generation clustered heat map. The interactive heat map this page describes can be reached at this link tcga_rppa_brca_v2.0_protein_protein or on one of the links below such as the Heat Map Name, Map Id, or the thumbnail graphic image or through the The Cancer Genome Atlas (TCGA) Next-Generation Clustered Heat Map (NG-CHM) Compendium viewer.

Heat Map Description

Protein-protein comparison of RPPA for 224 proteins in 877 tcga BRCA samples, using the 2017 TCGA Pan-Cancer RPPA data.

General Information

Heat Map Name: tcga_rppa_brca_v2.0_protein_protein
Map Id: b66845829fc4d8423548ee8bfb8965c2320f7efc

Tumor Type: Breast invasive carcinoma (BRCA)

cBioPortal Study Id: brca_tcga

Build Date:2017-06-05 08:26:07
Map Version Id:1.1.0

Top Layer Summary View

Next-Generation Clustered Heat Map thumbnail image. Click to go to full-sized next-generation heat map tcga_rppa_brca_v2.0_protein_protein.

Data Layers

Row Information

Number of Rows:224
Row Type:bio.rppa.antibody.name, bio.gene.hugo:list.space, bio.gene.entrezid:list.space

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

Column Information

Number of Columns:224
Column Type:bio.rppa.antibody.name, bio.gene.hugo:list.space, bio.gene.entrezid:list.space

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

Matrix Data Items

Row Labels:

Column Labels:

Related Pages

TCGA Heat Map Compendium Description Index Page
TCGA Heat Map Compendium
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