This page is an overview of serchable data in the tcga_rppa_gbm_v2.0_protein_sample next-generation clustered heat map. The interactive heat map this page describes can be reached at this link tcga_rppa_gbm_v2.0_protein_sample or on one of the links below such as the Heat Map Name, Map Id, or the thumbnail graphic image or through the The Cancer Genome Atlas (TCGA) Next-Generation Clustered Heat Map (NG-CHM) Compendium viewer.

Heat Map Description

RPPA for 223 variable proteins in 216 tcga GBM samples, using the 2017 TCGA Pan-Cancer RPPA data.

General Information

Heat Map Name: tcga_rppa_gbm_v2.0_protein_sample
Map Id: ad0315d16a483035bd480db802a1bce41750f6f7

Tumor Type: Glioblastoma multiforme (GBM)

cBioPortal Study Id: gbm_tcga

Build Date:2017-06-05 08:26:18
Map Version Id:1.1.0

Top Layer Summary View

Next-Generation Clustered Heat Map thumbnail image. Click to go to full-sized next-generation heat map tcga_rppa_gbm_v2.0_protein_sample.

Data Layers

Row Centered
Z Normalized
Unadjusted

Row Information

Number of Rows:223
Row Type:bio.rppa.antibody.name, bio.gene.hugo:list.space, bio.gene.entrezid:list.space

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

hasinfo

Column Information

Number of Columns:216
Column Type:bio.tcga.barcode.sample.vial.portion.analyte.aliquot

Order Method:Hierarchical
Agglomeration Method:ward.D2
Distance Metric:correlation
Has Dendrogram:Yes
Top Items:No top items

Classification Bars:

TP53 mutation
MUC4 mutation
MUC16 mutation
MLL3 mutation
CDC27 mutation
Selected RPPA Cluster

Matrix Data Items

Row Labels:

Column Labels:

TCGA-02-0003-01A-21-1898-20
TCGA-02-0004-01A-21-1898-20
TCGA-02-0011-01B-11-1898-20
TCGA-02-0068-01A-11-1898-20
TCGA-02-0116-01A-11-1898-20
TCGA-02-2485-01A-22-1899-20
TCGA-06-0125-01A-03-1900-20
TCGA-06-0125-02A-31-2189-20
TCGA-06-0126-01A-03-1900-20
TCGA-06-0128-01A-11-1898-20
TCGA-06-0129-01A-03-1900-20
TCGA-06-0130-01A-03-1900-20
TCGA-06-0152-02A-31-2189-20
TCGA-06-0154-01A-41-1898-20
TCGA-06-0155-01B-21-1898-20
TCGA-06-0156-01A-41-1898-20
TCGA-06-0171-01A-11-1898-20
TCGA-06-0171-02A-31-2189-20
TCGA-06-0189-01A-21-1898-20
TCGA-06-0190-01A-21-2214-20
TCGA-06-0190-02A-31-2189-20
TCGA-06-0210-02A-21-2189-20
TCGA-06-0221-02A-12-2189-20
TCGA-06-0238-01A-03-1900-20
TCGA-06-0644-01A-21-1898-20
TCGA-06-0650-01A-21-1898-20
TCGA-06-0875-01A-21-1898-20
TCGA-06-0876-01A-21-1898-20
TCGA-06-0877-01A-21-1898-20
TCGA-06-0878-01A-21-1898-20
TCGA-06-0879-01A-21-1898-20
TCGA-06-0882-01A-21-1898-20
TCGA-06-1086-01A-03-1900-20
TCGA-06-1087-01A-03-1900-20
TCGA-06-1800-01A-21-1898-20
TCGA-06-1802-01A-21-1899-20
TCGA-06-1804-01A-21-1899-20
TCGA-06-1805-01A-21-1899-20
TCGA-06-1806-01A-11-1899-20
TCGA-06-2557-01A-22-1899-20
TCGA-06-2558-01A-22-1899-20
TCGA-06-2559-01A-22-1899-20
TCGA-06-2562-01A-22-1899-20
TCGA-06-2563-01A-22-1899-20
TCGA-06-2564-01A-22-1899-20
TCGA-06-2565-01A-22-1899-20
TCGA-06-2566-01A-22-1899-20
TCGA-06-2567-01A-22-1899-20
TCGA-06-2570-01A-22-1899-20
TCGA-06-5408-01A-21-1899-20
TCGA-06-5410-01A-21-1899-20
TCGA-06-5411-01A-21-1899-20
TCGA-06-5412-01A-21-1899-20
TCGA-06-5413-01A-21-1899-20
TCGA-06-5414-01A-21-1899-20
TCGA-06-5415-01A-21-1899-20
TCGA-06-5416-01A-21-1899-20
TCGA-06-5417-01A-21-1899-20
TCGA-06-5418-01A-21-1899-20
TCGA-06-5856-01A-21-1899-20
TCGA-06-5858-01A-21-1899-20
TCGA-06-5859-01A-21-1899-20
TCGA-06-6388-01A-23-1900-20
TCGA-06-6389-01A-23-1900-20
TCGA-06-6390-01A-23-1900-20
TCGA-06-6391-01A-23-1900-20
TCGA-06-6693-01A-13-1900-20
TCGA-06-6694-01A-13-1900-20
TCGA-06-6695-01A-13-1900-20
TCGA-06-6697-01A-13-1900-20
TCGA-06-6698-01A-13-1900-20
TCGA-06-6699-01A-13-1900-20
TCGA-06-6700-01A-23-1900-20
TCGA-06-6701-01A-13-1900-20
TCGA-08-0245-01A-11-1898-20
TCGA-08-0344-01A-21-1898-20
TCGA-08-0345-01A-21-1898-20
TCGA-08-0346-01A-21-1898-20
TCGA-08-0347-01A-21-1898-20
TCGA-08-0348-01A-21-1898-20
TCGA-08-0349-01A-21-1898-20
TCGA-08-0350-01A-21-1898-20
TCGA-08-0351-01A-21-1898-20
TCGA-08-0352-01A-21-1898-20
TCGA-08-0353-01A-21-1898-20
TCGA-08-0354-01A-21-1898-20
TCGA-08-0355-01A-21-1898-20
TCGA-08-0356-01A-21-1898-20
TCGA-08-0357-01A-21-1898-20
TCGA-08-0358-01A-21-1898-20
TCGA-08-0359-01A-21-1898-20
TCGA-08-0360-01A-21-1898-20
TCGA-08-0373-01A-21-1898-20
TCGA-08-0375-01A-21-1898-20
TCGA-08-0380-01A-21-1898-20
TCGA-08-0385-01A-21-1898-20
TCGA-08-0386-01A-21-1898-20
TCGA-08-0389-01A-21-1898-20
TCGA-08-0390-01A-21-1898-20
TCGA-08-0392-01A-21-1898-20
TCGA-12-0691-01A-21-1898-20
TCGA-12-0692-01A-21-1898-20
TCGA-12-1597-01B-21-1898-20
TCGA-12-1598-01A-21-1898-20
TCGA-12-1599-01A-21-1898-20
TCGA-12-3646-01A-22-1899-20
TCGA-12-3649-01A-22-1899-20
TCGA-12-3651-01A-22-1899-20
TCGA-12-3652-01A-22-1899-20
TCGA-12-3653-01A-22-1899-20
TCGA-12-5295-01A-21-1899-20
TCGA-12-5301-01A-21-1899-20
TCGA-14-0736-02A-21-2189-20
TCGA-14-0813-01A-21-1898-20
TCGA-14-0862-01B-21-1898-20
TCGA-14-0871-01A-21-1898-20
TCGA-14-1034-02B-21-2189-20
TCGA-14-1823-01A-21-1899-20
TCGA-15-1446-01A-21-1898-20
TCGA-15-1447-01A-21-1898-20
TCGA-15-1449-01A-21-1898-20
TCGA-16-0846-01A-21-1898-20
TCGA-16-1460-01A-21-1898-20
TCGA-19-0957-01C-21-1898-20
TCGA-19-0957-02A-23-2189-20
TCGA-19-0962-01B-21-1898-20
TCGA-19-1386-01A-21-1898-20
TCGA-19-1389-01A-21-1898-20
TCGA-19-1389-02A-13-2189-20
TCGA-19-1390-01A-21-1898-20
TCGA-19-1392-01A-21-1898-20
TCGA-19-1786-01A-21-1898-20
TCGA-19-1788-01A-21-1898-20
TCGA-19-1789-01A-21-1898-20
TCGA-19-1790-01B-21-1899-20
TCGA-19-1791-01A-21-1898-20
TCGA-19-2619-01A-03-1900-20
TCGA-19-2620-01A-03-1900-20
TCGA-19-2631-01A-03-1900-20
TCGA-19-4065-01A-21-2214-20
TCGA-19-4065-02A-13-2189-20
TCGA-19-4068-01A-22-1899-20
TCGA-19-5947-01A-13-1899-20
TCGA-19-5950-01A-13-1900-20
TCGA-19-5951-01A-13-1900-20
TCGA-19-5952-01A-13-1900-20
TCGA-19-5953-01B-23-1900-20
TCGA-19-5954-01A-13-1900-20
TCGA-19-5955-01A-13-1900-20
TCGA-19-5956-01A-13-1900-20
TCGA-19-5958-01A-13-1900-20
TCGA-19-5959-01A-13-1900-20
TCGA-19-5960-01A-13-1900-20
TCGA-26-1440-01A-21-1898-20
TCGA-26-1442-01A-21-1898-20
TCGA-26-5132-01A-22-1899-20
TCGA-26-5133-01A-21-1899-20
TCGA-26-5134-01A-21-1899-20
TCGA-26-6173-01A-13-1900-20
TCGA-26-6174-01A-13-1900-20
TCGA-27-1830-01A-21-1899-20
TCGA-27-1831-01A-21-1899-20
TCGA-27-1832-01A-21-1899-20
TCGA-27-1833-01A-21-1899-20
TCGA-27-1834-01A-21-1899-20
TCGA-27-1836-01A-21-1899-20
TCGA-27-2518-01A-22-1899-20
TCGA-28-1746-01A-21-1898-20
TCGA-28-1747-01C-21-1899-20
TCGA-28-1750-01A-21-1898-20
TCGA-28-1752-01A-21-1898-20
TCGA-28-1757-01A-11-1898-20
TCGA-28-1760-01A-21-1898-20
TCGA-28-2501-01A-21-1899-20
TCGA-28-5208-01A-21-1899-20
TCGA-28-5214-01A-21-1899-20
TCGA-32-1970-01A-21-1899-20
TCGA-32-1976-01A-21-1899-20
TCGA-32-1978-01A-21-1899-20
TCGA-32-1982-01A-21-1899-20
TCGA-32-1986-01A-21-1899-20
TCGA-32-1987-01A-21-1899-20
TCGA-32-1991-01A-21-1899-20
TCGA-32-4210-01A-22-1899-20
TCGA-32-5222-01A-21-1899-20
TCGA-41-2573-01A-22-1899-20
TCGA-41-2575-01A-22-1899-20
TCGA-41-3392-01A-22-1899-20
TCGA-41-3393-01A-22-1899-20
TCGA-41-3915-01A-22-1899-20
TCGA-41-4097-01A-22-1899-20
TCGA-41-5651-01A-21-1899-20
TCGA-74-6573-01A-03-1900-20
TCGA-74-6575-01A-13-1900-20
TCGA-74-6577-01A-13-1900-20
TCGA-74-6578-01A-13-1900-20
TCGA-74-6581-01A-13-1900-20
TCGA-74-6584-01A-13-1900-20
TCGA-76-4926-01B-22-1899-20
TCGA-76-4927-01A-22-1899-20
TCGA-76-4928-01B-22-1899-20
TCGA-76-4929-01A-22-1899-20
TCGA-76-4931-01A-22-1899-20
TCGA-76-4932-01A-22-1899-20
TCGA-76-6192-01A-13-1900-20
TCGA-76-6193-01A-13-1900-20
TCGA-76-6283-01A-13-1900-20
TCGA-76-6285-01A-13-1900-20
TCGA-76-6656-01A-13-1900-20
TCGA-76-6657-01A-13-1900-20
TCGA-76-6660-01A-13-1900-20
TCGA-76-6661-01A-13-1900-20
TCGA-76-6662-01A-13-1900-20
TCGA-76-6663-01A-13-1900-20
TCGA-76-6664-01A-13-1900-20
TCGA-81-5910-01A-21-1899-20

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