MBatch
| Overview | |
| Description | R package to help assess and correct for batch effects. |
| Development Information | |
| GitHub | MD-Anderson-Bioinformatics/BatchEffectsPackage |
| Language | R |
| License | GPL (>=2) |
| Status | Active |
| Help and Support | |
| Contact | Rehan Akbani |
| Discussion | Issues On GitHub |
MBatch is a statistical tool that analyzes for the presence of Batch Effects in data. This tool was used to generate the data visualized in the TCGA Batch Effects website.
To download the R package:
To see MBatch applied to TCGA data:
LAUNCH TCGA BATCH EFFECTS WEBSITE
From the R command line
help(package="MBatch")Will list the description and the exposed functions and classes for this package.
With the package loaded, ?methodname will get the help for a method and class?classname will get the help for a class.